RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NEK11Q8NG66 645 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 PIH1D2Q8WWB5 315 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 TCTN2Q96GX1 697 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 ELMO2Q96JJ3 720 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 RUFY1Q96T51 708 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 SLC25A23Q9BV35 468 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 ZNF768Q9H5H4 540 aaKnown RBP9.44□□□□□ -0.9
RFFL-203ENST00000413582 UCK1Q9HA47 277 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 LHX9Q9NQ69 397 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 CPNE7Q9UBL6 633 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 ZNHIT2Q9UHR6 403 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 MYO6Q9UM54 1294 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 CAPN11Q9UMQ6 739 aa9.44□□□□□ -0.9
RFFL-203ENST00000413582 SEC16AO15027 2179 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 SPTBP11277 2137 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 AKR1B15C9JRZ8 316 aaPredicted RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 TOX3O15405 576 aaPredicted RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 DAPK3O43293 454 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 NRDCO43847 1150 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 FZD6O60353 706 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 SNX2O60749 519 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 SPAG6O75602 509 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 TIAF1O95411 115 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 ASMTLO95671 621 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 PTMAP06454 111 aaKnown RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 PDHA1P08559 390 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 FGF5P12034 268 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 ZNF30P17039 623 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 TYRP1P17643 537 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 LEPRP48357 1165 aaKnown RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 SEPHS1P49903 392 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 STC1P52823 247 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 RPS18P62269 152 aaKnown RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 ZBED6P86452 979 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 PTSQ03393 145 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 LAMB3Q13751 1172 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 INPP5JQ15735 1006 aaPredicted RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 UGT8Q16880 541 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 EIF2S3LQ2VIR3 472 aaKnown RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.43□□□□□ -0.9
RFFL-203ENST00000413582 RALGPS1Q5JS13 557 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 PRSS42Q7Z5A4 293 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 ARFGAP1Q8N6T3 406 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 EXD1Q8NHP7 514 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 PCMTD1Q96MG8 357 aaPredicted RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 TGM7Q96PF1 710 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 PLEKHG4BQ96PX9 1271 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 RIOK2Q9BVS4 552 aaKnown RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 NLRC4Q9NPP4 1024 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 ERRFI1Q9UJM3 462 aaPredicted RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 PADI1Q9ULC6 663 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 CNOT6Q9ULM6 557 aaKnown RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 LUC7L2Q9Y383 392 aaKnown RBP9.43□□□□□ -0.9
RFFL-203ENST00000413582 SLC30A1Q9Y6M5 507 aa9.43□□□□□ -0.9
RFFL-203ENST00000413582 A0A0J9YYE9 177 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 OR5K4A6NMS3 321 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 KIF1CO43896 1103 aaKnown RBP9.42□□□□□ -0.9
RFFL-203ENST00000413582 MAFKO60675 156 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 UBXN7O94888 489 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 TRBC1P01850 177 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 MT-ND3P03897 115 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 GYPCP04921 128 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 CCNYL3P0C7X3 344 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 DESP17661 470 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 POU3F2P20265 443 aaPredicted RBP9.42□□□□□ -0.9
RFFL-203ENST00000413582 PSMA2P25787 234 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 CAPZBP47756 277 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 IL10RAQ13651 578 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 PPP6R3Q5H9R7 873 aaPredicted RBP9.42□□□□□ -0.9
RFFL-203ENST00000413582 ERMARDQ5T6L9 678 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 HENMT1Q5T8I9 393 aaKnown RBP9.42□□□□□ -0.9
RFFL-203ENST00000413582 C1QL3Q5VWW1 255 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 JMJD6Q6NYC1 403 aaPredicted RBP9.42□□□□□ -0.9
RFFL-203ENST00000413582 DCUN1D2Q6PH85 259 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 TMEM26Q6ZUK4 368 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 PPP1R3BQ86XI6 285 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 PHYKPLQ8IUZ5 450 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 SPC24Q8NBT2 197 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 PRR7Q8TB68 274 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 THAP4Q8WY91 577 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 KLHL6Q8WZ60 621 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 SEC14L1Q92503 715 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 RSC1A1Q92681 617 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 SYN2Q92777 582 aaPredicted RBP9.42□□□□□ -0.9
RFFL-203ENST00000413582 PANX2Q96RD6 677 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 WDR24Q96S15 920 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 SLC29A3Q9BZD2 475 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 RMI1Q9H9A7 625 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 SEPT11Q9NVA2 429 aaKnown RBP9.42□□□□□ -0.9
RFFL-203ENST00000413582 ETNK2Q9NVF9 386 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 CWC15Q9P013 229 aaKnown RBP9.42□□□□□ -0.9
RFFL-203ENST00000413582 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
RFFL-203ENST00000413582 LUZP4Q9P127 313 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 PCSK1NQ9UHG2 260 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 ADGRG1Q9Y653 693 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 APCP25054 2843 aa9.42□□□□□ -0.9
RFFL-203ENST00000413582 ARGFXA6NJG6 315 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 FADS2P1A8MWK0 482 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 CEACAM4O75871 244 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 RASSF9O75901 435 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms