RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 ZNF189O75820 626 aaPredicted RBP12.98□□□□□ -0.33
SSB-203ENST00000413002 PRAMEF1O95521 474 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 AP2A1O95782 977 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 CAPNS1P04632 268 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 RPLP0P05388 317 aaKnown RBP12.98□□□□□ -0.33
SSB-203ENST00000413002 ALDH4A1P30038 563 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 LMAN1P49257 510 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 OR1D5P58170 312 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 TMEM115Q12893 351 aaPredicted RBP12.98□□□□□ -0.33
SSB-203ENST00000413002 TRIP13Q15645 432 aaPredicted RBP12.98□□□□□ -0.33
SSB-203ENST00000413002 CCDC38Q502W7 563 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 PDPK2PQ6A1A2 396 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 GSTA5Q7RTV2 222 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 ZNF761Q86XN6 746 aaPredicted RBP12.98□□□□□ -0.33
SSB-203ENST00000413002 ZNF547Q8IVP9 402 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 PRELID2Q8N945 189 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 ZNF398Q8TD17 642 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 CCDC97Q96F63 343 aaPredicted RBP12.98□□□□□ -0.33
SSB-203ENST00000413002 DNAJC1Q96KC8 554 aaKnown RBP12.98□□□□□ -0.33
SSB-203ENST00000413002 PPP1R2P1Q96PQ5 205 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 VPS35Q96QK1 796 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 AP1M1Q9BXS5 423 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 OSGEPL1Q9H4B0 414 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 ARNT2Q9HBZ2 717 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 PRDM8Q9NQV8 689 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 KLC4Q9NSK0 619 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 ZMIZ1Q9ULJ6 1067 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 AK5Q9Y6K8 562 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 USP24Q9UPU5 2620 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 FREM2Q5SZK8 3169 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 RHPN2P1A8MT19 583 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 E7EVH7 732 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 ZNF185O15231 689 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 PPM1DO15297 605 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 B4GAT1O43505 415 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 SRP72O76094 671 aaKnown RBP12.97□□□□□ -0.33
SSB-203ENST00000413002 CRTAMO95727 393 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 PRSS56P0CW18 603 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 GLB1P16278 677 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 ACTN2P35609 894 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 CDKN1CP49918 316 aaPredicted RBP12.97□□□□□ -0.33
SSB-203ENST00000413002 ZNF140P52738 457 aaPredicted RBP12.97□□□□□ -0.33
SSB-203ENST00000413002 CTSCP53634 463 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 XIAPP98170 497 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 BIRC2Q13490 618 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 PEX6Q13608 980 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 LRP8Q14114 963 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 SPIDRQ14159 915 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 SEPT7Q16181 437 aaKnown RBP12.97□□□□□ -0.33
SSB-203ENST00000413002 INSCQ1MX18 579 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 ISXQ2M1V0 245 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 AMZ1Q400G9 498 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 GPRC6AQ5T6X5 926 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 ZDHHC20Q5W0Z9 365 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 TTC27Q6P3X3 843 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 USP53Q70EK8 1073 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 DET1Q7L5Y6 550 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 B3GNT8Q7Z7M8 397 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 C17orf82Q86X59 251 aaPredicted RBP12.97□□□□□ -0.33
SSB-203ENST00000413002 TRAPPC5Q8IUR0 188 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 CCNJLQ8IV13 435 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 RASGEF1AQ8N9B8 481 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 DNAAF3Q8N9W5 541 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 ATXN7L3BQ96GX2 97 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 TTC25Q96NG3 672 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 DEPDC7Q96QD5 511 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 FOXP3Q9BZS1 431 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 LRRN3Q9H3W5 708 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 CCDC86Q9H6F5 360 aaKnown RBP12.97□□□□□ -0.33
SSB-203ENST00000413002 ASB8Q9H765 288 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 RMI1Q9H9A7 625 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 DRG1Q9Y295 367 aaKnown RBP12.97□□□□□ -0.33
SSB-203ENST00000413002 RP1P56715 2156 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 BPTFQ12830 3046 aa12.97□□□□□ -0.33
SSB-203ENST00000413002 KNTC1P50748 2209 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 A0A1W2PNU3 283 aaPredicted RBP12.96□□□□□ -0.33
SSB-203ENST00000413002 OR2AG2A6NM03 316 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 NTN3O00634 580 aaPredicted RBP12.96□□□□□ -0.33
SSB-203ENST00000413002 CHUKO15111 745 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 PSMD3O43242 534 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 VEGFDO43915 354 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 KIF5CO60282 957 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 MPOP05164 745 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 APRTP07741 180 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 ZNF7P17097 686 aaPredicted RBP12.96□□□□□ -0.33
SSB-203ENST00000413002 PBLDP30039 288 aaPredicted RBP12.96□□□□□ -0.33
SSB-203ENST00000413002 AKT1P31749 480 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 FDFT1P37268 417 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 VPS41P49754 854 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 PDX1P52945 283 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 B4GALNT1Q00973 533 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 GSE1Q14687 1217 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 NKAIN2Q5VXU1 208 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 FOXR1Q6PIV2 292 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 PPP1R21Q6ZMI0 780 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 RBM44Q6ZP01 1051 aaKnown RBP12.96□□□□□ -0.33
SSB-203ENST00000413002 TMPRSS9Q7Z410 1059 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 SPRED1Q7Z699 444 aa12.96□□□□□ -0.33
SSB-203ENST00000413002 LRRTM4Q86VH4 590 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms