RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 LILRB4Q8NHJ6 448 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 RANBP9Q96S59 729 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 NEURL2Q9BR09 285 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 TMEM246Q9BRR3 403 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 MARF1Q9Y4F3 1742 aaKnown RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 SCELO95171 688 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 TGFB3P10600 412 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 AZGP1P25311 298 aaKnown RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 PGGT1BP53609 377 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 HERVK_113P63132 956 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 PPP1R8Q12972 351 aaKnown RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 KCNAB2Q13303 367 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 MED22Q15528 200 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 AFG1LQ8WV93 481 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 ERVK-6Q9BXR3 956 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 ITM2CQ9NQX7 267 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 MRPL42Q9Y6G3 142 aaKnown RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 BTN3A3O00478 584 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 GABARAPL2P60520 117 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 RPL38P63173 70 aaKnown RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 STYK1Q6J9G0 422 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 PLET1Q6UQ28 207 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 CCBE1Q6UXH8 406 aaPredicted RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 TMEM135Q86UB9 458 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 SNX29P2Q8IUI4 249 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 THEM5Q8N1Q8 247 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 VPS37AQ8NEZ2 397 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 OR13F1Q8NGS4 319 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 BHMTQ93088 406 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 PAK1IP1Q9NWT1 392 aaPredicted RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 TOR4AQ9NXH8 423 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 POLR3HQ9Y535 204 aaPredicted RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 ARAP2Q8WZ64 1704 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 AGRPO00253 132 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 NPR3P17342 541 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 TIE1P35590 1138 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 AIF1P55008 147 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 WNT3AP56704 352 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 BTG3Q14201 252 aaPredicted RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 NCF4Q15080 339 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 ZNF517Q6ZMY9 492 aaPredicted RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 OR13J1Q8NGT2 312 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 OR10A6Q8NH74 314 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 NDRG1Q92597 394 aaKnown RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 PAWRQ96IZ0 340 aaKnown RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 PPP3R2Q96LZ3 170 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 MIR1-1HGQ9H1L0 117 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 CATSPERZQ9NTU4 200 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 GIMAP2Q9UG22 337 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 ENPP5Q9UJA9 477 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 RPS6KA6Q9UK32 745 aa13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 MAFBQ9Y5Q3 323 aaPredicted RBP13.8□□□□□ -0.2
CLTCL1-201ENST00000412649 MSCO60682 206 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 INMTO95050 263 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 MT-CYBP00156 380 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 FYNP06241 537 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 CD247P20963 164 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 PCSK1P29120 753 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 ALDH7A1P49419 539 aaKnown RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 OAZ1P54368 228 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 PURAQ00577 322 aaKnown RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 SCN1BQ07699 218 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 USP41Q3LFD5 358 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 INTS6LQ5JSJ4 861 aaKnown RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 FAM83AQ86UY5 434 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 TTC29Q8NA56 475 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 DHRS1Q96LJ7 313 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 SLC2A11Q9BYW1 496 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 PDP1Q9P0J1 537 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 FAM234BA2RU67 622 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 C2orf81A6NN90 581 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 XPNPEP2O43895 674 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 MAPK1P28482 360 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 NRG1Q02297 640 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 CCDC28AQ8IWP9 274 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 COPS4Q9BT78 406 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 DSN1Q9H410 356 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 PCDHGA10Q9Y5H3 936 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 CPSF4O95639 269 aaKnown RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 USP17L7P0C7H9 530 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 CES1P23141 567 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 GJA9P57773 515 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 JAG1P78504 1218 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 SPCS2Q15005 226 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 ZC3H12BQ5HYM0 836 aaKnown RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 ELMOD2Q8IZ81 293 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 CADM3Q8N126 398 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 PIK3C3Q8NEB9 887 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 IPCEF1Q8WWN9 437 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 PGLYRP2Q96PD5 576 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 XYLT2Q9H1B5 865 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 ZNF112Q9UJU3 913 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 UBR2Q8IWV8 1755 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 DYNC1LI2O43237 492 aaPredicted RBP13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 CYP2B6P20813 491 aa13.79□□□□□ -0.2
CLTCL1-201ENST00000412649 CHRNA5P30532 468 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms