RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 MC2RQ01718 297 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 WDR74Q6RFH5 385 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 C11orf96Q7Z7L8 435 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 NT5DC3Q86UY8 548 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 AHCYL2Q96HN2 611 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 ARHGAP9Q9BRR9 750 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 SLC25A51Q9H1U9 297 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 BPIFA1Q9NP55 256 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 ABHD10Q9NUJ1 306 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 SIDT1Q9NXL6 827 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 IL17BQ9UHF5 180 aa16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.28■□□□□ 0.2
SCAMP4-203ENST00000411971 RGSL1A5PLK6 1076 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 ZNF487B1APH4 448 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 TERTO14746 1132 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 NKX2-8O15522 239 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 SLC25A14O95258 325 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 ZNF28P17035 718 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 PTPN3P26045 913 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 CHRNA4P43681 627 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 DCDC1P59894 354 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 CDK18Q07002 472 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 WASHC5Q12768 1159 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 PEX6Q13608 980 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 ZNF569Q5MCW4 686 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 ATP1A1-AS1Q5TC04 95 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 RFX6Q8HWS3 928 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 VSTM4Q8IW00 320 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 IL22RA1Q8N6P7 574 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 CCHCR1Q8TD31 782 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 GLYATL1Q969I3 302 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 DPYSL5Q9BPU6 564 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 RMI1Q9H9A7 625 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 GLOD4Q9HC38 313 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 MAGEE1Q9HCI5 957 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 TRIM39Q9HCM9 518 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 NFKBIL1Q9UBC1 381 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 TFR2Q9UP52 801 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 DNAJC16Q9Y2G8 782 aa16.27■□□□□ 0.2
SCAMP4-203ENST00000411971 MN1Q10571 1320 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 ZW10O43264 779 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 AKR1B10O60218 316 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 MFAP3LO75121 409 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 PMPCBO75439 489 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 WISP1O95388 367 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 DLGAP3O95886 979 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 TYRP1P17643 537 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 F8A1P23610 371 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 CDKN2BP42772 138 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 LEPRP48357 1165 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 MARCKSL1P49006 195 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 PPM1FP49593 454 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 CLCNKAP51800 687 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 PRKD1Q15139 912 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 SEPT7Q16181 437 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 TAZQ16635 292 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 TEX44Q53QW1 395 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 DCAF12Q5T6F0 453 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 KDELC1Q6UW63 502 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 SLC9B2Q86UD5 537 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 TTC30BQ8N4P2 665 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 TRAM1L1Q8N609 369 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 ZNF830Q96NB3 372 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 HERPUD2Q9BSE4 406 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 ADGRE3Q9BY15 652 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 ZMYND15Q9H091 742 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 OSGEPL1Q9H4B0 414 aa16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 MRPS18BQ9Y676 258 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-203ENST00000411971 KIR2DS5A0A0G2JLQ3 304 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 A0A0G2JNG1 304 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 LILRA5A6NI73 299 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 OR52A4PA6NMU1 304 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 KIR2DS3K7RE56 304 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 SUV39H1O43463 412 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 KIF1CO43896 1103 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 NDST3O95803 873 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 C9P02748 559 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 ZNF7P17097 686 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 XRCC1P18887 633 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 COMTP21964 271 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 RPL10P27635 214 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 ATP1A2P50993 1020 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 EPHA4P54764 986 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 PPP1CAP62136 330 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 SH3BP2P78314 561 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 KIR2DS5Q14953 304 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 PDK1Q15118 436 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 ATP13A5Q4VNC0 1218 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 MICALCLQ6ZW33 695 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 VSIG1Q86XK7 387 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 ZSCAN1Q8NBB4 408 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 NAT14Q8WUY8 206 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 RSC1A1Q92681 617 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 OXNAD1Q96HP4 312 aaPredicted RBP16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 TEKT5Q96M29 485 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 GORASP1Q9BQQ3 440 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 GPR63Q9BZJ6 419 aa16.25■□□□□ 0.19
SCAMP4-203ENST00000411971 DEF6Q9H4E7 631 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms