RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 RAI2Q9Y5P3 530 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 TMEM88BA6NKF7 163 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ZSCAN9O15535 394 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 TRMUO75648 421 aaKnown RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 TMCC1O94876 653 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ZBTB11O95625 1053 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ABCB1P08183 1280 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 IMPDH2P12268 514 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 FUT4P22083 530 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 IL10P22301 178 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ESRRGP62508 458 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 KIAA0930Q6ICG6 404 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 PGBD5Q8N414 524 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 MAGEE2Q8TD90 523 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 EEF1AKMT1Q8WVE0 214 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 CCDC126Q96EE4 140 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 FAR2Q96K12 515 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 ATG10Q9H0Y0 220 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 HMX1Q9NP08 348 aaPredicted RBP13.29□□□□□ -0.28
COL6A2-204ENST00000409416 WWOXQ9NZC7 414 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 RNF11Q9Y3C5 154 aa13.29□□□□□ -0.28
COL6A2-204ENST00000409416 INSIG1O15503 277 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 CAPN15O75808 1086 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 CHEK2O96017 543 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 CLCN5P51795 746 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 MTPNP58546 118 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 GNA12Q03113 381 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 HERC3Q15034 1050 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 UGT3A1Q6NUS8 523 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 CHSY3Q70JA7 882 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 SLC44A2Q8IWA5 706 aaPredicted RBP13.28□□□□□ -0.28
COL6A2-204ENST00000409416 PIANPQ8IYJ0 282 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 HMGCLL1Q8TB92 370 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 TWIST2Q8WVJ9 160 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 SORCS1Q8WY21 1168 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 SUSD3Q96L08 255 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 C17orf80Q9BSJ5 609 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 BBS2Q9BXC9 721 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 PRKD2Q9BZL6 878 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 ZDHHC6Q9H6R6 413 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 POLR3BQ9NW08 1133 aaPredicted RBP13.28□□□□□ -0.28
COL6A2-204ENST00000409416 BPTFQ12830 3046 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 MTMR11A4FU01 709 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 TRIM24O15164 1050 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 SLC6A4P31645 630 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 MAGEA8P43361 318 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 NEK2P51955 445 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 DGKEP52429 567 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 SH3BP2P78314 561 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 NEDD8Q15843 81 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 FAM180BQ6P0A1 224 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 BHLHA9Q7RTU4 235 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 GALNT10Q86SR1 603 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 BOCQ9BWV1 1114 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 SLC25A51Q9H1U9 297 aa13.28□□□□□ -0.28
COL6A2-204ENST00000409416 MYO1GB0I1T2 1018 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 ZNF26P17031 533 aaPredicted RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 PSMA4P25789 261 aaKnown RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 SLC5A2P31639 672 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 HK2P52789 917 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 SH3BGRP55822 239 aaPredicted RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 RAD51Q06609 339 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 LRP8Q14114 963 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 VEPH1Q14D04 833 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 OR4D1Q15615 310 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 PGS1Q32NB8 556 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 UAP1L1Q3KQV9 507 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 TMEM207Q6UWW9 146 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 RANBP10Q6VN20 620 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 RETREG3Q86VR2 466 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 CILP2Q8IUL8 1156 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 SLC22A9Q8IVM8 553 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 BTN2A3PQ96KV6 586 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 IL12RB2Q99665 862 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 SLC30A3Q99726 388 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 TTPALQ9BTX7 342 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 TAS2R13Q9NYV9 303 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 SLAMF8Q9P0V8 285 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 SUCOQ9UBS9 1254 aaKnown RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 RSL24D1Q9UHA3 163 aaKnown RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 NDUFAF1Q9Y375 327 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 MYOFQ9NZM1 2061 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 NINQ8N4C6 2090 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 DHRS12A0PJE2 317 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 MAGEB3O15480 346 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 FGF10O15520 208 aaPredicted RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 PRAMEF12O95522 483 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 NTRK1P04629 796 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 ALDOCP09972 364 aaKnown RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 ITPKAP23677 461 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 GABRR2P28476 465 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 PFKPQ01813 784 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 LAPTM5Q13571 262 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 INPP5AQ14642 412 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 SF1Q15637 639 aaKnown RBP13.27□□□□□ -0.28
COL6A2-204ENST00000409416 RAB41Q5JT25 222 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 BNIPLQ7Z465 357 aa13.27□□□□□ -0.28
COL6A2-204ENST00000409416 DDX53Q86TM3 631 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms