RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 SIPA1Q96FS4 1042 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 FETUBQ9UGM5 382 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 IPO13O94829 963 aaKnown RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 TRIM74Q86UV6 250 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 TRIM73Q86UV7 250 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 PRMT6Q96LA8 375 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 HTATIP2Q9BUP3 242 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 DENND2DQ9H6A0 471 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 PCDHGB5Q9Y5G0 923 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 POMCP01189 267 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 MARSP56192 900 aaKnown RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 OR2B6P58173 313 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 USP30Q70CQ3 517 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 GSTCDQ8NEC7 633 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 TAAR1Q96RJ0 339 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 H3BRB1 525 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 H7C2Y5 167 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 OR1I1O60431 355 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 NDUFS2O75306 463 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 ZNF157P51786 506 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 PRAMEF17Q5VTA0 474 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 C16orf46Q6P387 395 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 PLEKHH3Q7Z736 793 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 UNC5BQ8IZJ1 945 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 GPR156Q8NFN8 814 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 SLC35C1Q96A29 364 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 UNC93B1Q9H1C4 597 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 TUT1Q9H6E5 874 aaKnown RBP12.07□□□□□ -0.48
SHANK2-203ENST00000409161 MAT2BQ9NZL9 334 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 SYVN1Q86TM6 617 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 C17orf64Q86WR6 236 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 DEFB106AQ8N104 65 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 ZNF285Q96NJ3 590 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 RNF157Q96PX1 679 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 PCBD2Q9H0N5 130 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 EGFL7Q9UHF1 273 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 DIP2AQ14689 1571 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 PREX1Q8TCU6 1659 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 KERAO60938 352 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 ATG13O75143 517 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 ZMPSTE24O75844 475 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 AMIGO2Q86SJ2 522 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 ANKRD52Q8NB46 1076 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 MAFIPQ8WZ33 124 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 ATG4CQ96DT6 458 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 ZNF350Q9GZX5 532 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 CHST7Q9NS84 486 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 HPF1Q9NWY4 346 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 FKBP7Q9Y680 259 aa12.07□□□□□ -0.48
SHANK2-203ENST00000409161 KDM4BO94953 1096 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 LAMP2P13473 410 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 CAP2P40123 477 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 DEFA5Q01523 94 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 GALNT7Q86SF2 657 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 RSPH9Q9H1X1 276 aaPredicted RBP12.06□□□□□ -0.48
SHANK2-203ENST00000409161 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.06□□□□□ -0.48
SHANK2-203ENST00000409161 ALOX15BO15296 676 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 GNALP38405 381 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 SMARCB1Q12824 385 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 PGM5Q15124 567 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 DPY19L1Q2PZI1 675 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 MAP4K3Q8IVH8 894 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 ATXN3LQ9H3M9 355 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 ZNF3P17036 446 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 CD247P20963 164 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 MAB21L1Q13394 359 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 CDKL4Q5MAI5 379 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 FAM171A1Q5VUB5 890 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 RAET1GQ6H3X3 334 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 CNDP2Q96KP4 475 aaKnown RBP12.06□□□□□ -0.48
SHANK2-203ENST00000409161 CIB1Q99828 191 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.06□□□□□ -0.483e-6■■■■□ 22.6
SHANK2-203ENST00000409161 TNKS2Q9H2K2 1166 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 CEMIPQ8WUJ3 1361 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
SHANK2-203ENST00000409161 M0R036 132 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 DHX15O43143 795 aaKnown RBP12.06□□□□□ -0.48
SHANK2-203ENST00000409161 LINGO3P0C6S8 592 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 VWA5B1Q5TIE3 1220 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 DNAJB3Q8WWF6 145 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 SLC38A4Q969I6 547 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 NPAS2Q99743 824 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 ZNF471Q9BX82 626 aaPredicted RBP12.06□□□□□ -0.48
SHANK2-203ENST00000409161 A0A1W2PQ67 120 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 TLX3O43711 291 aaPredicted RBP12.06□□□□□ -0.48
SHANK2-203ENST00000409161 AMD1P17707 334 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 RGS8P57771 180 aaPredicted RBP12.06□□□□□ -0.48
SHANK2-203ENST00000409161 TSPAN5P62079 268 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 NFIXQ14938 502 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 FAM117BQ6P1L5 589 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 PACRGLQ8N7B6 248 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 SGCDQ92629 289 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 KCTD7Q96MP8 289 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 A0A087X0B3 334 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 PER2O15055 1255 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 NOL9Q5SY16 702 aaKnown RBP12.06□□□□□ -0.48
SHANK2-203ENST00000409161 CCNB2O95067 398 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 CLDN9O95484 217 aa12.06□□□□□ -0.48
SHANK2-203ENST00000409161 SLC2A2P11168 524 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms