RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PRDX3P30048 256 aaKnown RBP16.69■□□□□ 0.26
NUP50-203ENST00000407019 GRIA3P42263 894 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 PTGER3P43115 390 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 MRPL19P49406 292 aaKnown RBP16.69■□□□□ 0.26
NUP50-203ENST00000407019 HK3P52790 923 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 ADARP55265 1226 aaKnown RBP16.69■□□□□ 0.26
NUP50-203ENST00000407019 TWF1Q12792 350 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 PTPRRQ15256 657 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 XKR7Q5GH72 579 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 UGT3A1Q6NUS8 523 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 BLOC1S3Q6QNY0 202 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 RNF168Q8IYW5 571 aaPredicted RBP16.69■□□□□ 0.26
NUP50-203ENST00000407019 STK40Q8N2I9 435 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 CARNMT1Q8N4J0 409 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 TSPEARQ8WU66 669 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 COQ10BQ9H8M1 238 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 PFDN4Q9NQP4 134 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 AIG1Q9NVV5 245 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 HSFX1Q9UBD0 423 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 EIF2B4Q9UI10 523 aaKnown RBP16.69■□□□□ 0.26
NUP50-203ENST00000407019 PKP3Q9Y446 797 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 ZNF711Q9Y462 761 aa16.69■□□□□ 0.26
NUP50-203ENST00000407019 SMIM31A0A1B0GVY4 71 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 TBL1XO60907 577 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 CYBBP04839 570 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 FAM58BPP0C7Q3 252 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 HSD17B1P14061 328 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 MZF1P28698 734 aaPredicted RBP16.68■□□□□ 0.26
NUP50-203ENST00000407019 DIO3P55073 304 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 RHOAP61586 193 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 MYBPC1Q00872 1141 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 BNIP2Q12982 314 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 CAPRIN1Q14444 709 aaKnown RBP16.68■□□□□ 0.26
NUP50-203ENST00000407019 INO80DQ53TQ3 878 aaPredicted RBP16.68■□□□□ 0.26
NUP50-203ENST00000407019 MTX3Q5HYI7 312 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 GPRIN3Q6ZVF9 776 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 SLC15A3Q8IY34 581 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 ZNF461Q8TAF7 563 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 ZFAND2BQ8WV99 257 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 LRRC58Q96CX6 371 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 TRMT2BQ96GJ1 504 aaKnown RBP16.68■□□□□ 0.26
NUP50-203ENST00000407019 SCLYQ96I15 445 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 ZNF597Q96LX8 424 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 TRIM4Q9C037 500 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 ZNF696Q9H7X3 374 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 SARS2Q9NP81 518 aaKnown RBP16.68■□□□□ 0.26
NUP50-203ENST00000407019 SMPD4Q9NXE4 827 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 PLK2Q9NYY3 685 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 STOML2Q9UJZ1 356 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 PCDHGB4Q9UN71 923 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 PCDHGB5Q9Y5G0 923 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 BRCA2P51587 3418 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 ABLIM3O94929 683 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 PGM3O95394 542 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 MBL2P11226 248 aaPredicted RBP16.68■□□□□ 0.26
NUP50-203ENST00000407019 GSTT1P30711 240 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 KCNK10P57789 538 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 ROR2Q01974 943 aaKnown RBP16.68■□□□□ 0.26
NUP50-203ENST00000407019 CACNG1Q06432 222 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 GRIK2Q13002 908 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 IKBKEQ14164 716 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 GK3PQ14409 553 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 VEPH1Q14D04 833 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 NRF1Q16656 503 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 HMBOX1Q6NT76 420 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 SATL1Q86VE3 508 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 SLAIN1Q8ND83 568 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 IGSF21Q96ID5 467 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 SLC2A11Q9BYW1 496 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 SLC52A3Q9NQ40 469 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 ARMC1Q9NVT9 282 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 NUDT4Q9NZJ9 180 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 NDUFA13Q9P0J0 144 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 IL17CQ9P0M4 197 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 ZNF225Q9UK10 706 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 LZTS1Q9Y250 596 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 AK5Q9Y6K8 562 aa16.68■□□□□ 0.26
NUP50-203ENST00000407019 A0A0U1RQS6 177 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 AQP12BA6NM10 295 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 E2F3O00716 465 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 TPGS2Q68CL5 300 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 AMIGO2Q86SJ2 522 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 AQP12AQ8IXF9 295 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 CANT1Q8WVQ1 401 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 ESAMQ96AP7 390 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 PPWD1Q96BP3 646 aaKnown RBP16.67■□□□□ 0.26
NUP50-203ENST00000407019 ZNF382Q96SR6 550 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 MRPS26Q9BYN8 205 aaKnown RBP16.67■□□□□ 0.26
NUP50-203ENST00000407019 GPR63Q9BZJ6 419 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 P2RY12Q9H244 342 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 EPB41L1Q9H4G0 881 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 RIC8BQ9NVN3 520 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 CMTM6Q9NX76 183 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 APPL1Q9UKG1 709 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 FCF1Q9Y324 198 aaKnown RBP16.67■□□□□ 0.26
NUP50-203ENST00000407019 PCDHB9Q9Y5E1 797 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 SLC30A1Q9Y6M5 507 aa16.67■□□□□ 0.26
NUP50-203ENST00000407019 A0A1W2PP18 115 aa16.66■□□□□ 0.26
NUP50-203ENST00000407019 FZD6O60353 706 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms