RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 PKD2L2Q9NZM6 624 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 ZNF624Q9P2J8 865 aaPredicted RBP11.76□□□□□ -0.53
LINC00544-201ENST00000400540 RCOR3Q9P2K3 495 aaPredicted RBP11.76□□□□□ -0.53
LINC00544-201ENST00000400540 DNPEPQ9ULA0 475 aa11.76□□□□□ -0.53
LINC00544-201ENST00000400540 SHANK1Q9Y566 2161 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 BLACEA4D250 179 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 KIF1CO43896 1103 aaKnown RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 MTX2O75431 263 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 KATNA1O75449 491 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 UBXN7O94888 489 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 PDGFAP04085 211 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 PIRTP0C851 137 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 CA4P22748 312 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 CCNCP24863 283 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 SLC19A1P41440 591 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 UQCRFS1P47985 274 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 RPL26P61254 145 aaKnown RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 PPP1CAP62136 330 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 SLC10A2Q12908 348 aaPredicted RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 SEPT6Q14141 434 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 IFI16Q16666 785 aaKnown RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 CRTC2Q53ET0 693 aaPredicted RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 ANKRD20A8PQ5CZ79 823 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 CCDC122Q5T0U0 273 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 HIST2H2BCQ6DN03 193 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 C6orf15Q6UXA7 325 aaPredicted RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 TMEM26Q6ZUK4 368 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 ADGRG6Q86SQ4 1221 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 LRRC49Q8IUZ0 686 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 RAVER1Q8IY67 606 aaKnown RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 GPR26Q8NDV2 337 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 RSC1A1Q92681 617 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 PSMG3-AS1Q96PY0 264 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 MLPHQ9BV36 600 aaPredicted RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 SPATA16Q9BXB7 569 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 EPB41L1Q9H4G0 881 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 ZNF768Q9H5H4 540 aaKnown RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 IP6K2Q9UHH9 426 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 RPL26L1Q9UNX3 145 aaKnown RBP11.75□□□□□ -0.53
LINC00544-201ENST00000400540 DNAJC16Q9Y2G8 782 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 KCTD3Q9Y597 815 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 MED13Q9UHV7 2174 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 CRYBG3Q68DQ2 2970 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
LINC00544-201ENST00000400540 A0A1B0GTH6 734 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 CDC14CA4D256 554 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 OR5K4A6NMS3 321 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 OR52A4PA6NMU1 304 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 ANKRD66B4E2M5 251 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 KCNK1O00180 336 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 RASSF9O75901 435 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 DNAJB5O75953 348 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 SLC25A14O95258 325 aaPredicted RBP11.74□□□□□ -0.53
LINC00544-201ENST00000400540 NDUFA10O95299 355 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 TIAF1O95411 115 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 VIPP01282 170 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 CYP1A2P05177 515 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 KRT7P08729 469 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 BRAFP15056 766 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 XRCC1P18887 633 aaPredicted RBP11.74□□□□□ -0.53
LINC00544-201ENST00000400540 CES1P23141 567 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 CD97P48960 835 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 CLCNKAP51800 687 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 TAS2R40P59535 323 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 ZBTB17Q13105 803 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 INSCQ1MX18 579 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 KHDC1Q4VXA5 237 aaKnown RBP11.74□□□□□ -0.53
LINC00544-201ENST00000400540 ZNF569Q5MCW4 686 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 CCDC183Q5T5S1 534 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 FAM92BQ6ZTR7 304 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 RASGRP3Q8IV61 690 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 PQLC3Q8N755 202 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 CCHCR1Q8TD31 782 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 FATE1Q969F0 183 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 STAMBPL1Q96FJ0 436 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 TSGA13Q96PP4 275 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 RUFY1Q96T51 708 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 CEP41Q9BYV8 373 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 UCK1Q9HA47 277 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 AMACRQ9UHK6 382 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 LNPEPQ9UIQ6 1025 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 SHOC2Q9UQ13 582 aa11.74□□□□□ -0.53
LINC00544-201ENST00000400540 UNC79Q9P2D8 2635 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 A0A087X0T9 212 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 RGSL1A5PLK6 1076 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 PDZK1P1A8MUH7 402 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 MKRN2OSH3BPM6 223 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 CHUKO15111 745 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 MTA2O94776 668 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 JCHAINP01591 159 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 NTRK1P04629 796 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 FAM228BP0C875 321 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 AMD1P17707 334 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 RPL10P27635 214 aaKnown RBP11.73□□□□□ -0.53
LINC00544-201ENST00000400540 NOP2P46087 812 aaKnown RBP11.73□□□□□ -0.53
LINC00544-201ENST00000400540 CAPZBP47756 277 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 DRG2P55039 364 aaKnown RBP11.73□□□□□ -0.53
LINC00544-201ENST00000400540 SPTBN1Q01082 2364 aaKnown RBP11.73□□□□□ -0.53
LINC00544-201ENST00000400540 GPR18Q14330 331 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms