RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CHID1Q9BWS9 393 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 ABCB8Q9NUT2 735 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 ARL5AQ9Y689 179 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 SPATA31C2B4DYI2 1134 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 COL6A1P12109 1028 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 SCNN1AP37088 669 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 VPS26BQ4G0F5 336 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 ARSJQ5FYB0 599 aaPredicted RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 TMEM220Q6QAJ8 160 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 ZHX1-C8orf76Q96EF9 292 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 AIF1LQ9BQI0 150 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 OR51V1Q9H2C8 321 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 PHPT1Q9NRX4 125 aaPredicted RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 SSR3Q9UNL2 185 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 RGSL1A5PLK6 1076 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 FAM149AA5PLN7 773 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 ITGB3BPQ13352 177 aaPredicted RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 ZFP1Q6P2D0 407 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 CUZD1Q86UP6 607 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 PPTC7Q8NI37 304 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 A0A1W2PRU2 124 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 WNT7AO00755 349 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 ELF3P78545 371 aaPredicted RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 ZNF846Q147U1 533 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 QPRTQ15274 297 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 RBM44Q6ZP01 1051 aaKnown RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 ZNF598Q86UK7 904 aaKnown RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 ZNF611Q8N823 705 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 STK32AQ8WU08 396 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 LCN9Q8WX39 176 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 MYDGFQ969H8 173 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 ZNF184Q99676 751 aaPredicted RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 WASF2Q9Y6W5 498 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.67□□□□□ -0.22
VAPA-202ENST00000400000 LYNP07948 512 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 ITGB5P18084 799 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 CPXM1Q96SM3 734 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 NECTIN3Q9NQS3 549 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 MARK1Q9P0L2 795 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 MALT1Q9UDY8 824 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 MED31Q9Y3C7 131 aa13.67□□□□□ -0.22
VAPA-202ENST00000400000 TCRBV9S1A1TA0A576 114 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 USP2O75604 605 aaPredicted RBP13.66□□□□□ -0.22
VAPA-202ENST00000400000 GTF2BQ00403 316 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 DUPD1Q68J44 220 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 PIK3C3Q8NEB9 887 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 WDR60Q8WVS4 1066 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 KCNMB3Q9NPA1 279 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 GRIN2DO15399 1336 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 PRAMEF1O95521 474 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 LMO2P25791 158 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 CHN2P52757 468 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 LRP8Q14114 963 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 TAB1Q15750 504 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 TRAF6Q9Y4K3 522 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 NRXN1Q9ULB1 1477 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 MTX2O75431 263 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 EIF1AXP47813 144 aaKnown RBP13.66□□□□□ -0.22
VAPA-202ENST00000400000 PSEN1P49768 467 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 NOMO3P69849 1222 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 FCHO2Q0JRZ9 810 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 SULT1C3Q6IMI6 304 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 ADAMTSL2Q86TH1 951 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 CRYBG2Q8N1P7 616 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 GRHL3Q8TE85 626 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 AGAP11Q8TF27 550 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 UPF1Q92900 1129 aaKnown RBP eCLIP13.66□□□□□ -0.221e-6■■■□□ 15.7
VAPA-202ENST00000400000 TBATAQ96M53 351 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 EBNA1BP2Q99848 306 aaKnown RBP13.66□□□□□ -0.22
VAPA-202ENST00000400000 CDH19Q9H159 772 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 TOR3AQ9H497 397 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 PLEKHA1Q9HB21 404 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 PCDH18Q9HCL0 1135 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 GGA2Q9UJY4 613 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 MAFFQ9ULX9 164 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 DHRS12A0PJE2 317 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 ZNF208O43345 1280 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 PRMT3O60678 531 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 RSL1D1O76021 490 aaKnown RBP13.66□□□□□ -0.22
VAPA-202ENST00000400000 ANPEPP15144 967 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 LAG3P18627 525 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 GRSF1Q12849 480 aaKnown RBP eCLIP13.66□□□□□ -0.22
VAPA-202ENST00000400000 ESRP1Q6NXG1 681 aaKnown RBP13.66□□□□□ -0.22
VAPA-202ENST00000400000 CLEC4CQ8WTT0 213 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 CDK15Q96Q40 435 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 UBIAD1Q9Y5Z9 338 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 CPQQ9Y646 472 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 A0A087WXM4 84 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 ITGA2P17301 1181 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 TLR1Q15399 786 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 C6orf52Q5T4I8 152 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 BROXQ5VW32 411 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 SLC22A15Q8IZD6 547 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 GSTCDQ8NEC7 633 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 OR2L3Q8NG85 312 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 Q96MT0 163 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 COLEC10Q9Y6Z7 277 aa13.66□□□□□ -0.22
VAPA-202ENST00000400000 PLGP00747 810 aaPredicted RBP13.65□□□□□ -0.22
VAPA-202ENST00000400000 TACR2P21452 398 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms