RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 PRRG3Q9BZD7 231 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 MINDY3Q9H8M7 445 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ARHGEF4Q9NR80 690 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 DMAC2Q9NW81 257 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 KIAA1522Q9P206 1035 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 EVLQ9UI08 416 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 DAPK2Q9UIK4 370 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 LEF1Q9UJU2 399 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 TEX264Q9Y6I9 313 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 CUL9Q8IWT3 2517 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PLIN4Q96Q06 1357 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 A0A087WXM4 84 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 OR51F1A6NGY5 319 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PSMD11O00231 422 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ERAL1O75616 437 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 PRAMEF1O95521 474 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ADH1CP00326 375 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 GOT2P00505 430 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 PRKCGP05129 697 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ICAM3P32942 547 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ADARP55265 1226 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 PRKCZQ05513 592 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TRAF3Q13114 568 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 CRHR2Q13324 411 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 GSTA3Q16772 222 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ZSWIM7Q19AV6 140 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 NDUFAF6Q330K2 333 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 VPS26BQ4G0F5 336 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ATXN7L2Q5T6C5 722 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 GDF6Q6KF10 455 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 NAPRTQ6XQN6 538 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 RBM44Q6ZP01 1051 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 NEK10Q6ZWH5 1172 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ECHDC2Q86YB7 292 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PQLC1Q8N2U9 271 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ARL14EPQ8N8R7 260 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 CMASQ8NFW8 434 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 MRPL48Q96GC5 212 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 ITCHQ96J02 903 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SNX27Q96L92 541 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 LENG8Q96PV6 779 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 VPS35Q96QK1 796 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 MTERF1Q99551 399 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 GPR21Q99679 349 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TPK1Q9H3S4 243 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PRDM16Q9HAZ2 1276 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ARHGEF3Q9NR81 526 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ATAD3AQ9NVI7 634 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 OSER1Q9NX31 292 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 MRPL39Q9NYK5 338 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 GGA2Q9UJY4 613 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PRDM4Q9UKN5 801 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 VPS4AQ9UN37 437 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SORCS3Q9UPU3 1222 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SH3GLB1Q9Y371 365 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PLXNB3Q9ULL4 1909 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 FNDC1Q4ZHG4 1894 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 TRBV23OR9-2A0A075B6M9 112 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 CXorf49A8MYA2 514 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 CHURC1-FNTBB4DL54 471 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SLC31A1O15431 190 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 INSIG1O15503 277 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 EDF1O60869 148 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 NDST3O95803 873 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TOP3BO95985 862 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 IFNA16P05015 189 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PRG2P13727 222 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TPSB2P20231 275 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 MAGEA10P43363 369 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 CHRNA4P43681 627 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 IDH3AP50213 366 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 GNA12Q03113 381 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 C2orf80Q0P641 193 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 RALGDSQ12967 914 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 EIF2B5Q13144 721 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 TPSAB1Q15661 275 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 KCTD21Q4G0X4 260 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PITRM1Q5JRX3 1037 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 RNASEH2BQ5TBB1 312 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 SYPL2Q5VXT5 272 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PSRC1Q6PGN9 363 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 KIAA0408Q6ZU52 694 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 UNC5BQ8IZJ1 945 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 OFCC1Q8IZS5 231 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ZCCHC7Q8N3Z6 543 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 MSL3Q8N5Y2 521 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 HJURPQ8NCD3 748 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 OSCP1Q8WVF1 389 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TWIST2Q8WVJ9 160 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 NKD2Q969F2 451 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 SLC47A1Q96FL8 570 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PPP3R2Q96LZ3 170 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 CDK15Q96Q40 435 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TCF25Q9BQ70 676 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ACBD6Q9BR61 282 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ABCB8Q9NUT2 735 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 CLN6Q9NWW5 311 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 CFAP97Q9P2B7 532 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 NFKBIL1Q9UBC1 381 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms