RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 KIAA1024LP59773 190 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 KRT76Q01546 638 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 GCNT1Q02742 428 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 KDSRQ06136 332 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 XRCC4Q13426 336 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 VGLL4Q14135 290 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 RBBP5Q15291 538 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 NTRK2Q16620 822 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 TMTC4Q5T4D3 741 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 NCCRP1Q6ZVX7 275 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 LRRC8DQ7L1W4 858 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 PLEKHH3Q7Z736 793 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 SRRM1Q8IYB3 904 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 LRRC34Q8IZ02 419 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 KIF2BQ8N4N8 673 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 IL17RCQ8NAC3 791 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ATAD1Q8NBU5 361 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 SHCBP1Q8NEM2 672 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 AKR7LQ8NHP1 331 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 CLHC1Q8NHS4 586 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 PHOSPHO2Q8TCD6 241 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 CPB2Q96IY4 423 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 SECISBP2Q96T21 854 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 RBM15Q96T37 977 aaKnown RBP eCLIP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 COQ7Q99807 217 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 SEMA3CQ99985 751 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 FRMD8P1Q9BZ68 369 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 CDC42EP4Q9H3Q1 356 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 TXNRD2Q9NNW7 524 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 NGBQ9NPG2 151 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 GPR27Q9NS67 375 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 TMEM140Q9NV12 185 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 NUDT15Q9NV35 164 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ANAPC2Q9UJX6 822 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ADAM30Q9UKF2 790 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 POLR2AP24928 1970 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 DOCK1Q14185 1865 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ZNF716A6NP11 495 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 K7ERQ8 282 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 SLC16A6O15403 523 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 PRPF4O43172 522 aaKnown RBP eCLIP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 RHBDL1O75783 438 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 MATN4O95460 622 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ECDO95905 644 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 IGHEP01854 428 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 KLKB1P03952 638 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 CD48P09326 243 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ZNF735P0CB33 412 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 CYP2C8P10632 490 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 LCP1P13796 627 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 WASP42768 502 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 FLT3LGP49771 235 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ARFIP2P53365 341 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 RABGGTBP53611 331 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 OGDHQ02218 1023 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 HSPA14Q0VDF9 509 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 TUBB3Q13509 450 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 GRTP1Q5TC63 336 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ANO7Q6IWH7 933 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 RANBP10Q6VN20 620 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 TMCO2Q7Z6W1 182 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 KBTBD6Q86V97 674 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 PPIL6Q8IXY8 311 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 KIRREL3Q8IZU9 778 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 C4orf33Q8N1A6 199 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 TFAP2BQ92481 460 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 TSPAN17Q96FV3 270 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 RPRD1AQ96P16 312 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 INTS14Q96SY0 518 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 TMEM121Q9BTD3 319 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 MAGEB5Q9BZ81 275 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 RNF32Q9H0A6 362 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ASCC2Q9H1I8 757 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 RIBC2Q9H4K1 309 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 MINDY3Q9H8M7 445 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 IPPKQ9H8X2 491 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 FAM212BQ9NTI7 297 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 ZDHHC3Q9NYG2 299 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 CPA4Q9UI42 421 aa6.2□□□□□ -1.42
TRAPPC13-202ENST00000399438 OTOFQ9HC10 1997 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 C1QTNF9BB2RNN3 333 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 CCDC188H7C350 402 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 TEX28O15482 410 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 DNPH1O43598 174 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 CXCL8P10145 99 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 CCDC130P13994 396 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 BSGP35613 385 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 JAK3P52333 1124 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 IRF9Q00978 393 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 CALCOCO2Q13137 446 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 SNTB1Q13884 538 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 TMED2Q15363 201 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 SIX1Q15475 284 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 TRIM71Q2Q1W2 868 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 ASTLQ6HA08 431 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 MCOLN2Q8IZK6 566 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 UBA3Q8TBC4 463 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 LPAR1Q92633 364 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 FBXO32Q969P5 355 aa6.19□□□□□ -1.42
TRAPPC13-202ENST00000399438 HDAC11Q96DB2 347 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms