RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PCOLCE2Q9UKZ9 415 aa17.48■□□□□ 0.39
CTNS-203ENST00000399306 SUFUQ9UMX1 484 aa17.48■□□□□ 0.39
CTNS-203ENST00000399306 GPR34Q9UPC5 381 aa17.48■□□□□ 0.39
CTNS-203ENST00000399306 SPTBN4Q9H254 2564 aa17.48■□□□□ 0.39
CTNS-203ENST00000399306 CFAP99D6REC4 459 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 TP73O15350 636 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 UGT1A9O60656 530 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 CDK14O94921 469 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 FUCA1P04066 466 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 GIMD1P0DJR0 217 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 RALBP11234 206 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 UGT1A6P19224 532 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 UGT1A1P22309 533 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 UGT1A4P22310 534 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 FOXN2P32314 431 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 UGT1A3P35503 534 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 UGT1A5P35504 534 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 PPARGP37231 505 aaPredicted RBP17.47■□□□□ 0.39
CTNS-203ENST00000399306 RPL21P46778 160 aaKnown RBP17.47■□□□□ 0.39
CTNS-203ENST00000399306 ARSDP51689 593 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 ITGA8P53708 1063 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 PRAMEP78395 509 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 TMPRSS15P98073 1019 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 ILF3Q12906 894 aaKnown RBP eCLIP17.47■□□□□ 0.39
CTNS-203ENST00000399306 GTF2H3Q13889 308 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 ZNF542PQ5EBM4 170 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 AARS2Q5JTZ9 985 aaKnown RBP17.47■□□□□ 0.39
CTNS-203ENST00000399306 KIAA0930Q6ICG6 404 aaPredicted RBP17.47■□□□□ 0.39
CTNS-203ENST00000399306 GLRX5Q86SX6 157 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 TRIM74Q86UV6 250 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 RBFAQ8N0V3 343 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 MPP5Q8N3R9 675 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 OR4L1Q8NH43 312 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 LMX1AQ8TE12 382 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 HDAC10Q969S8 669 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 ZNF778Q96MU6 729 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 TTC25Q96NG3 672 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 COPS8Q99627 209 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 GSDMCQ9BYG8 508 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 TCEAL2Q9H3H9 227 aaPredicted RBP17.47■□□□□ 0.39
CTNS-203ENST00000399306 UGT1A7Q9HAW7 530 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 UGT1A10Q9HAW8 530 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 UGT1A8Q9HAW9 530 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 MRPL40Q9NQ50 206 aaKnown RBP17.47■□□□□ 0.39
CTNS-203ENST00000399306 ZDHHC3Q9NYG2 299 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 TMEM98Q9Y2Y6 226 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 ARHGEF17Q96PE2 2063 aaPredicted RBP17.47■□□□□ 0.39
CTNS-203ENST00000399306 BPTFQ12830 3046 aa17.47■□□□□ 0.39
CTNS-203ENST00000399306 CCDC162PA2VCL2 907 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 ESPNB1AK53 854 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 KMOO15229 486 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 EIF3HO15372 352 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTNS-203ENST00000399306 GRID2O43424 1007 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 SH3BP5O60239 455 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 AVILO75366 819 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 USP1O94782 785 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 TTC4O95801 387 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 GSTM1P09488 218 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 CEACAM1P13688 526 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 ACRV1P26436 265 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 POLD2P49005 469 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 ARL4CP56559 192 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 IL9RQ01113 521 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 GSTM4Q03013 218 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 LRRTM4Q86VH4 590 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 GATAD2AQ86YP4 633 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 LMNTD2Q8IXW0 634 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 GDAP1Q8TB36 358 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 GLMNQ92990 594 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 TIMM29Q9BSF4 260 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 FOXP3Q9BZS1 431 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 CLPBQ9H078 707 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 OR2AG1Q9H205 316 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 L2HGDHQ9H9P8 463 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 EVA1BQ9NVM1 165 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 UCKL1Q9NWZ5 548 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 SLC2A6Q9UGQ3 507 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 SNX24Q9Y343 169 aa17.46■□□□□ 0.39
CTNS-203ENST00000399306 PIKFYVEQ9Y2I7 2098 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 BHMG1C9JSJ3 638 aaPredicted RBP17.45■□□□□ 0.38
CTNS-203ENST00000399306 E7ESA3 106 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 F8W8V4 182 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 GOLGA8MH3BSY2 632 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 QSOX1O00391 747 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 SDC3O75056 442 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 GOT2P00505 430 aaKnown RBP17.45■□□□□ 0.38
CTNS-203ENST00000399306 ANXA6P08133 673 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 ZNF8P17098 575 aaPredicted RBP17.45■□□□□ 0.38
CTNS-203ENST00000399306 GNPDA1P46926 289 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 TERF1P54274 439 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 CRADDP78560 199 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 HIF1AQ16665 826 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 ANKRD20A4Q4UJ75 823 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 BCL7AQ4VC05 210 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 ZRANB3Q5FWF4 1079 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 C6orf132Q5T0Z8 1188 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 KCTD16Q68DU8 428 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 ZCCHC8Q6NZY4 707 aaKnown RBP17.45■□□□□ 0.38
CTNS-203ENST00000399306 CASC4Q6P4E1 433 aa17.45■□□□□ 0.38
CTNS-203ENST00000399306 DOK6Q6PKX4 331 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms