RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SNX13Q9Y5W8 968 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 C2orf78A6NCI8 922 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ANKRD66B4E2M5 251 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CRCPO75575 148 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 F11P03951 625 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 INHAP05111 366 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 LPOP22079 712 aaPredicted RBP18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HOXD12P35452 270 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CAPRIN1Q14444 709 aaKnown RBP18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ZRANB3Q5FWF4 1079 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SAMD4BQ5PRF9 694 aaKnown RBP18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 AMIGO2Q86SJ2 522 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HERC6Q8IVU3 1022 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 MIER2Q8N344 545 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TTC16Q8NEE8 873 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CDK5RAP1Q96SZ6 601 aaKnown RBP18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SARS2Q9NP81 518 aaKnown RBP18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PTTG2Q9NZH5 202 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TSR3Q9UJK0 312 aaKnown RBP18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SMIM31A0A1B0GVY4 71 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ILVBLA1L0T0 632 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 IQCF5A8MTL0 148 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HMGA1P17096 107 aaKnown RBP18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TRAF2Q12933 501 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ANKS6Q68DC2 871 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 EEF1AKMT1Q8WVE0 214 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 Q9H521 79 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ARIH1Q9Y4X5 557 aaPredicted RBP18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ASB1Q9Y576 335 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 GBF1Q92538 1859 aa18.2■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CCDC160A6NGH7 325 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CD160O95971 181 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CDK4P11802 303 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 RPS6KA2Q15349 733 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 MAP7D1Q3KQU3 841 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CTSL3PQ5NE16 218 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SLC8B1Q6J4K2 584 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CXorf57Q6NSI4 855 aaKnown RBP18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 LRRC43Q8N309 656 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PCYOX1LQ8NBM8 494 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SEPT8Q92599 483 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 BHMTQ93088 406 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ZNF225Q9UK10 706 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 OAS3Q9Y6K5 1087 aaKnown RBP18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 A0A1B0GVM2 712 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ZNF839A8K0R7 811 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 NME4O00746 187 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 C1RP00736 705 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CAPNS1P04632 268 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SMIM18P0DKX4 95 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PKMP14618 531 aaKnown RBP18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ZNF26P17031 533 aaPredicted RBP18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 LBPP18428 481 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 GRIA3P42263 894 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ATP6V0D1P61421 351 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TRAP1Q12931 704 aaKnown RBP18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 IYDQ6PHW0 289 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CRIPAKQ8N1N5 446 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 DGCR14Q96DF8 476 aaKnown RBP18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ABHD8Q96I13 439 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 VN1R3Q9BXE9 311 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 COQ10BQ9H8M1 238 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TCRBV3S1A0A5B6 114 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ANGPT2O15123 496 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TSPAN12O95859 305 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TUFMP49411 452 aaKnown RBP18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TWF1Q12792 350 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PLD1Q13393 1074 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 MTX3Q5HYI7 312 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ADGRF1Q5T601 910 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HACD2Q6Y1H2 254 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 DHFR2Q86XF0 187 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TOP1MTQ969P6 601 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TCF12Q99081 682 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ACOX2Q99424 681 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 EGFL7Q9UHF1 273 aa18.19■□□□□ 0.5
CHRFAM7A-202ENST00000397827 C7orf72A4D263 438 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TMEM247A6NEH6 219 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 STX7O15400 261 aaKnown RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 PRAMEF12O95522 483 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 RPS17P08708 135 aaKnown RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 BMP1P13497 986 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ATP6V1B2P21281 511 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 MZF1P28698 734 aaPredicted RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ALDH7A1P49419 539 aaKnown RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 APLP1P51693 650 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 HK3P52790 923 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 B3GNT6Q6ZMB0 384 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 SYVN1Q86TM6 617 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CPNE9Q8IYJ1 553 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 CANT1Q8WVQ1 401 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 ROPN1LQ96C74 230 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 LINGO1Q96FE5 620 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TEX37Q96LM6 180 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 NOL11Q9H8H0 719 aaKnown RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 MTRRQ9UBK8 725 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 TRMT6Q9UJA5 497 aaKnown RBP18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 AP1G1O43747 822 aa18.18■□□□□ 0.5
CHRFAM7A-202ENST00000397827 VPS26AO75436 327 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms