RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 CYTH1Q15438 398 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 TMEM52BQ4KMG9 183 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 INO80DQ53TQ3 878 aaPredicted RBP13.61□□□□□ -0.23
SEC13-205ENST00000397101 ENPP7Q6UWV6 458 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 GDPD4Q6W3E5 623 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 SPRED1Q7Z699 444 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 PAF1Q8N7H5 531 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 GLIS1Q8NBF1 620 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 MAML1Q92585 1016 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 SLCO2A1Q92959 643 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 FATE1Q969F0 183 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 TSACCQ96A04 125 aaPredicted RBP13.61□□□□□ -0.23
SEC13-205ENST00000397101 TEKT5Q96M29 485 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 PSMG3-AS1Q96PY0 264 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 POLR1EQ9GZS1 481 aaKnown RBP13.61□□□□□ -0.23
SEC13-205ENST00000397101 PDFQ9HBH1 243 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 RNF215Q9Y6U7 377 aa13.61□□□□□ -0.23
SEC13-205ENST00000397101 UNC13CQ8NB66 2214 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 GOLGA6CA6NDK9 693 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 GOLGA6BA6NDN3 693 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 HGSO14964 777 aaPredicted RBP13.6□□□□□ -0.23
SEC13-205ENST00000397101 GOLGA6DP0CG33 693 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 NFKB1P19838 968 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 FDFT1P37268 417 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 HSPA9P38646 679 aaKnown RBP13.6□□□□□ -0.23
SEC13-205ENST00000397101 TNNT3P45378 269 aaPredicted RBP13.6□□□□□ -0.23
SEC13-205ENST00000397101 SCNN1BP51168 640 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 POLE2P56282 527 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 RAD51Q06609 339 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 ELP6Q0PNE2 266 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.23
SEC13-205ENST00000397101 PARP6Q2NL67 630 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 FAM26EQ8N5C1 309 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 TEX26Q8N6G2 289 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 OR6K2Q8NGY2 324 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 RTP4Q96DX8 246 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 EXOC2Q96KP1 924 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 ERP44Q9BS26 406 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 APOOQ9BUR5 198 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 GLOD4Q9HC38 313 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 RAB6BQ9NRW1 208 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 GOLGA6AQ9NYA3 693 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 KLQ9UEF7 1012 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 MAN2B2Q9Y2E5 1009 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 SNX24Q9Y343 169 aa13.6□□□□□ -0.23
SEC13-205ENST00000397101 CAPN5O15484 640 aaPredicted RBP13.59□□□□□ -0.23
SEC13-205ENST00000397101 CPNE6O95741 557 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 IGSF6O95976 241 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 PEX11BO96011 259 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 HOXC4P09017 264 aaPredicted RBP13.59□□□□□ -0.23
SEC13-205ENST00000397101 TIMP2P16035 220 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 PSMB4P28070 264 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 CCR10P46092 362 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 MAPK10P53779 464 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 MTM1Q13496 603 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 NR1D2Q14995 579 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 WSCD2Q2TBF2 565 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 C14orf28Q4W4Y0 310 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 IZUMO3Q5VZ72 239 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 PCGF5Q86SE9 256 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 TSEN2Q8NCE0 465 aaKnown RBP13.59□□□□□ -0.23
SEC13-205ENST00000397101 BBOF1Q8ND07 529 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 IFT81Q8WYA0 676 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 NKD1Q969G9 470 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 SNF8Q96H20 258 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 WDR92Q96MX6 357 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 GDAP1L1Q96MZ0 367 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 GBA3Q9H227 469 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 ETNK1Q9HBU6 452 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 LRIT1Q9P2V4 623 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 ATP8A1Q9Y2Q0 1164 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 CHD5Q8TDI0 1954 aa13.59□□□□□ -0.23
SEC13-205ENST00000397101 TTC24A2A3L6 582 aaPredicted RBP13.58□□□□□ -0.24
SEC13-205ENST00000397101 NDC80O14777 642 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 TNFRSF10CO14798 259 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 PSMD3O43242 534 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 ZW10O43264 779 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 ANXA9O76027 345 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 METTL18O95568 372 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 GEMP55040 296 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 B4GALNT1Q00973 533 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 DSC2Q02487 901 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEC13-205ENST00000397101 ARHGEF7Q14155 803 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 C16orf72Q14CZ0 275 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 SKIDA1Q1XH10 827 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 ERCC6LQ2NKX8 1250 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 ATXN7L2Q5T6C5 722 aaPredicted RBP13.58□□□□□ -0.24
SEC13-205ENST00000397101 TMPRSS9Q7Z410 1059 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 ZNF438Q7Z4V0 828 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 PIM3Q86V86 326 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 C17orf82Q86X59 251 aaPredicted RBP13.58□□□□□ -0.24
SEC13-205ENST00000397101 PTRH1Q86Y79 214 aaKnown RBP13.58□□□□□ -0.24
SEC13-205ENST00000397101 IFT20Q8IY31 132 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 CNTD1Q8N815 330 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 Q8N9G6 341 aaPredicted RBP13.58□□□□□ -0.24
SEC13-205ENST00000397101 PPP1R2P1Q96PQ5 205 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 PSKH2Q96QS6 385 aa13.58□□□□□ -0.24
SEC13-205ENST00000397101 TAAR9Q96RI9 348 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms