RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 VAV2P52735 878 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 CYP4F2P78329 520 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 KCNAB2Q13303 367 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 IHHQ14623 411 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 SLC14A2Q15849 920 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 ANKS6Q68DC2 871 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 CHST15Q7LFX5 561 aaPredicted RBP16.12■□□□□ 0.17
CLTA-203ENST00000396603 PLXDC1Q8IUK5 500 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 CCDC13Q8IYE1 715 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 LPCAT1Q8NF37 534 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 SRPK1Q96SB4 655 aaKnown RBP16.12■□□□□ 0.17
CLTA-203ENST00000396603 ZSCAN5AQ9BUG6 496 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 TBC1D29Q9UFV1 150 aa16.12■□□□□ 0.17
CLTA-203ENST00000396603 OAS3Q9Y6K5 1087 aaKnown RBP16.12■□□□□ 0.17
CLTA-203ENST00000396603 BTNL10A8MVZ5 291 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 GRID2O43424 1007 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 POLE2P56282 527 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 IFI35P80217 286 aaPredicted RBP16.11■□□□□ 0.17
CLTA-203ENST00000396603 PPIDQ08752 370 aaKnown RBP16.11■□□□□ 0.17
CLTA-203ENST00000396603 NIPAL4Q0D2K0 466 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 KIF5AQ12840 1032 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 GSE1Q14687 1217 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 MESDQ14696 234 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 QPCTQ16769 361 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 ODF2Q5BJF6 829 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 RAD9BQ6WBX8 426 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 TMEM139Q8IV31 216 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 JPH3Q8WXH2 748 aaPredicted RBP16.11■□□□□ 0.17
CLTA-203ENST00000396603 TSGA10Q9BZW7 698 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 GPN2Q9H9Y4 310 aaPredicted RBP16.11■□□□□ 0.17
CLTA-203ENST00000396603 TTLL3Q9Y4R7 772 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 ADGRG1Q9Y653 693 aa16.11■□□□□ 0.17
CLTA-203ENST00000396603 A0A0U1RQS6 177 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 FADS2P1A8MWK0 482 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 EML2O95834 649 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 C9P02748 559 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 ATP1A1P05023 1023 aaKnown RBP16.1■□□□□ 0.17
CLTA-203ENST00000396603 XRCC1P18887 633 aaPredicted RBP16.1■□□□□ 0.17
CLTA-203ENST00000396603 MPSTP25325 297 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 NAP1L1P55209 391 aaKnown RBP16.1■□□□□ 0.17
CLTA-203ENST00000396603 UBE2IP63279 158 aaKnown RBP16.1■□□□□ 0.17
CLTA-203ENST00000396603 ZNF569Q5MCW4 686 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 ZFYVE27Q5T4F4 411 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 LRRC8AQ8IWT6 810 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 RBM12BQ8IXT5 1001 aaKnown RBP16.1■□□□□ 0.17
CLTA-203ENST00000396603 ESX1Q8N693 406 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 PQLC3Q8N755 202 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 NCSTNQ92542 709 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 SMIM14Q96QK8 99 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 BRD8Q9H0E9 1235 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 ZFYVE1Q9HBF4 777 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 MAGEE1Q9HCI5 957 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 DTLQ9NZJ0 730 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 CPNE7Q9UBL6 633 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 ANAPC2Q9UJX6 822 aa16.1■□□□□ 0.17
CLTA-203ENST00000396603 CHUKO15111 745 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 POLR1CO15160 346 aaPredicted RBP16.09■□□□□ 0.17
CLTA-203ENST00000396603 SPOPO43791 374 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 DLGAP3O95886 979 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 PTMAP06454 111 aaKnown RBP16.09■□□□□ 0.17
CLTA-203ENST00000396603 MMP2P08253 660 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 ACP5P13686 325 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 PPM1FP49593 454 aaPredicted RBP16.09■□□□□ 0.17
CLTA-203ENST00000396603 GBE1Q04446 702 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 NFATC2Q13469 925 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 LRRC38Q5VT99 294 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 CYB5D1Q6P9G0 228 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 ZNF761Q86XN6 746 aaPredicted RBP16.09■□□□□ 0.17
CLTA-203ENST00000396603 TRAM1L1Q8N609 369 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 CCNYQ8ND76 341 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 RNF157Q96PX1 679 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 TIMM29Q9BSF4 260 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 SIDT1Q9NXL6 827 aaKnown RBP16.09■□□□□ 0.17
CLTA-203ENST00000396603 KCNK6Q9Y257 313 aa16.09■□□□□ 0.17
CLTA-203ENST00000396603 PCYT1BQ9Y5K3 369 aaPredicted RBP16.09■□□□□ 0.17
CLTA-203ENST00000396603 PJA2O43164 708 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 VEGFDO43915 354 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 STK17BO94768 372 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 JCHAINP01591 159 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 CD86P42081 329 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 CDC20Q12834 499 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 ATP13A4Q4VNC1 1196 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 C11orf63Q6NUN7 778 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 WASH2PQ6VEQ5 465 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 ACRBPQ8NEB7 543 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 DTX3LQ8TDB6 740 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 APOBEC4Q8WW27 367 aaKnown RBP16.08■□□□□ 0.16
CLTA-203ENST00000396603 TRIB3Q96RU7 358 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 TRIM4Q9C037 500 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 WASH6PQ9NQA3 447 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 POT1Q9NUX5 634 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 ATXN10Q9UBB4 475 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLTA-203ENST00000396603 PRKAB1Q9Y478 270 aa16.08■□□□□ 0.16
CLTA-203ENST00000396603 TRBV23OR9-2A0A075B6M9 112 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 PRR19A6NJB7 356 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 PYCARD-AS1I3L0S3 204 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 KMOO15229 486 aa16.07■□□□□ 0.16
CLTA-203ENST00000396603 KCNJ13O60928 360 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms