RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PAQR3Q6TCH7 311 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 DEFB123Q8N688 67 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 LRRC8CQ8TDW0 803 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 PTERQ96BW5 349 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 ERLEC1Q96DZ1 483 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 GPR21Q99679 349 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 MRPL57Q9BQC6 102 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 ZSCAN5AQ9BUG6 496 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 WRAP53Q9BUR4 548 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 RIOK2Q9BVS4 552 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 FBRSQ9HAH7 460 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 OXSMQ9NWU1 459 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 IQCF5A8MTL0 148 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 WNT9AO14904 365 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 KLF8O95600 359 aaPredicted RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 KCNA4P22459 653 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 XPAP23025 273 aaPredicted RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 IRX4P78413 519 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 PFKPQ01813 784 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 OCRLQ01968 901 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 DPTQ07507 201 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 CSHL1Q14406 222 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 AGERQ15109 404 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 SLC44A4Q53GD3 710 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 TBC1D1Q86TI0 1168 aaPredicted RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 NUDCD3Q8IVD9 361 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 DDHD1Q8NEL9 900 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 PPM1EQ8WY54 764 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 DERL2Q9GZP9 239 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 CRLS1Q9UJA2 301 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 DHRS7Q9Y394 339 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 C10orf142B7Z368 130 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 C6P13671 934 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 GLRBP48167 497 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 SKIV2LQ15477 1246 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 PUS10Q3MIT2 529 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 KHDC1Q4VXA5 237 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 OTOAQ7RTW8 1153 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 SIDT2Q8NBJ9 832 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 TXNDC5Q8NBS9 432 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 PDLIM5Q96HC4 596 aaKnown RBP12.59□□□□□ -0.39
TRIM39-204ENST00000396548 XPR1Q9UBH6 696 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 GNPTGQ9UJJ9 305 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 FAM50BQ9Y247 325 aa12.59□□□□□ -0.39
TRIM39-204ENST00000396548 PPARGP37231 505 aaPredicted RBP12.58□□□□□ -0.4
TRIM39-204ENST00000396548 NSG1P42857 185 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 CHI3L2Q15782 390 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 FAM83EQ2M2I3 478 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 GPRC6AQ5T6X5 926 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 AGAP9Q5VTM2 703 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 ZNF776Q68DI1 518 aaPredicted RBP12.58□□□□□ -0.4
TRIM39-204ENST00000396548 NAPRTQ6XQN6 538 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 CLDN19Q8N6F1 224 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 NAT14Q8WUY8 206 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 SPATA16Q9BXB7 569 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 MRPL46Q9H2W6 279 aaKnown RBP12.58□□□□□ -0.4
TRIM39-204ENST00000396548 DUSP12Q9UNI6 340 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 COQ6Q9Y2Z9 468 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 GOLGA8CPA6NN73 597 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 DLX3O60479 287 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 SKIV2L2P42285 1042 aaKnown RBP12.58□□□□□ -0.4
TRIM39-204ENST00000396548 BST1Q10588 318 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 GBX1Q14549 363 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 RHEBL1Q8TAI7 183 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 BTN2A2Q8WVV5 523 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 FAM3CQ92520 227 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 COL6A3P12111 3177 aa12.58□□□□□ -0.4
TRIM39-204ENST00000396548 NDUFAB1O14561 156 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 SNX3O60493 162 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 SYNCRIPO60506 623 aaKnown RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 MMP20O60882 483 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 VPS26AO75436 327 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 PDAP1Q13442 181 aaKnown RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 ACOX1Q15067 660 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 OR4D1Q15615 310 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 TRMT11Q7Z4G4 463 aaKnown RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 TRIM42Q8IWZ5 723 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 C7orf26Q96N11 449 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 SORT1Q99523 831 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 TTC1Q99614 292 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 COPS8Q99627 209 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 UNKQ9C0B0 810 aaKnown RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 CLPBQ9H078 707 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 ZNF395Q9H8N7 513 aaPredicted RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 DYRK4Q9NR20 520 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 CPSF2Q9P2I0 782 aaKnown RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 PIKFYVEQ9Y2I7 2098 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 ZBTB14O43829 449 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 RECQL5O94762 991 aaPredicted RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 DNAJB13P59910 316 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 TFF2Q03403 129 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 HSF5Q4G112 596 aaPredicted RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 ZNF658BQ4V348 819 aaPredicted RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 FOXR1Q6PIV2 292 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 TMEM92Q6UXU6 159 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 FAM136AQ96C01 138 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 ATOH8Q96SQ7 321 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms