RNA–Protein interactions for RNA: ENST00000396495.3

TNFRSF17-202, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-202ENST00000396495 PDPRQ8NCN5 879 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 TMEM104Q8NE00 496 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 C17orf47Q8NEP4 570 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 OR52H1Q8NGJ2 320 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 CEMIPQ8WUJ3 1361 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 TMEM143Q96AN5 459 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 TESCQ96BS2 214 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 DUS3LQ96G46 650 aaKnown RBP4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 ZNF597Q96LX8 424 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 PLEKHF1Q96S99 279 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 PPP1R16BQ96T49 567 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 UHRF1Q96T88 793 aaPredicted RBP4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 KRT12Q99456 494 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 PELOQ9BRX2 385 aaKnown RBP4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 C2orf88Q9BSF0 95 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 UBAC1Q9BSL1 405 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 CHID1Q9BWS9 393 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 TBC1D10AQ9BXI6 508 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 C1QTNF3Q9BXJ4 246 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 CEP41Q9BYV8 373 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 OPN3Q9H1Y3 402 aaPredicted RBP4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 RMND5AQ9H871 391 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 COPS7BQ9H9Q2 264 aaPredicted RBP4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 MCCC2Q9HCC0 563 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 ARHGEF4Q9NR80 690 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 VPS45Q9NRW7 570 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 DDX19AQ9NUU7 478 aaKnown RBP4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 ZSCAN32Q9NX65 697 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 NPAP1Q9NZP6 1156 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 CTSFQ9UBX1 484 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 NKX1-2Q9UD57 310 aaPredicted RBP4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 TUBE1Q9UJT0 475 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 DOLKQ9UPQ8 538 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 ARL2BPQ9Y2Y0 163 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 DHRS7Q9Y394 339 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 FKBP7Q9Y680 259 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 KCNE2Q9Y6J6 123 aa4.59□□□□□ -1.67
TNFRSF17-202ENST00000396495 CEP170BQ9Y4F5 1589 aaPredicted RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 OVOS2A0A0G2JMS6 1433 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 OVOS2A0A0J9YW53 1432 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 OVOS2Q6IE36 1432 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 NID2Q14112 1375 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 ROBO2Q9HCK4 1378 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 A0A1W2PPC1 479 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 A0A1W2PRG0 241 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 A0A1W2PRG6 482 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 GSAPA4D1B5 854 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 FAM149AA5PLN7 773 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 LINC00862A6NCI5 91 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 CCDC85CA6NKD9 419 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 MEI4A8MW99 385 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 H3BNX3 289 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 H7C4K7 107 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 EEF2KO00418 725 aaKnown RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 INPPL1O15357 1258 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 NUPL2O15504 423 aaKnown RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 MSI1O43347 362 aaKnown RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 KCNAB3O43448 404 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 KCNQ3O43525 872 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 NOBOXO60393 691 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 ZNF821O75541 412 aaPredicted RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 ERAL1O75616 437 aaKnown RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 BCAS2O75934 225 aaPredicted RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 NOL4O94818 638 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 SORBS2O94875 1100 aaKnown RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 SPDEFO95238 335 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 LGI1O95970 557 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 CCNE2O96020 404 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 IFNA2P01563 188 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 EPOP01588 193 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 NTRK1P04629 796 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 S100A8P05109 93 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 TFAP2AP05549 437 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 KRT8P05787 483 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 CKMP06732 381 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 IGFBP1P08833 259 aaPredicted RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 CTXN2P0C2S0 81 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 RNF224P0DH78 156 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 SMIM18P0DKX4 95 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 RNH1P13489 461 aaKnown RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 C6P13671 934 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 AKR1A1P14550 325 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 HNRNPLP14866 589 aaKnown RBP eCLIP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 CYP11B1P15538 503 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 CYP2A7P20853 494 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 NT5EP21589 574 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 WARSP23381 471 aaKnown RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 PTPN4P29074 926 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 CDC25AP30304 524 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 GNA15P30679 374 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 GPX4P36969 197 aaPredicted RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 CEACAM6P40199 344 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 IL12RB1P42701 662 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 RABIFP47224 123 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 GABRB2P47870 512 aa4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 LEPRP48357 1165 aaKnown RBP4.58□□□□□ -1.68
TNFRSF17-202ENST00000396495 SOX9P48436 509 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms