RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 DCUN1D5Q9BTE7 237 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 CDH19Q9H159 772 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 TRNAU1APQ9NX07 287 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 DKK3Q9UBP4 350 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 SLC27A6Q9Y2P4 619 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 C7orf72A4D263 438 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PSMD12O00232 456 aaPredicted RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 HOXC11O43248 304 aaPredicted RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 AQP9O43315 295 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 MOSPD3O75425 235 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 ESRRBO95718 433 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PRLP01236 227 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 SERPINE1P05121 402 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PABPC1P11940 636 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 POU3F3P20264 500 aaPredicted RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 MGAT1P26572 445 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 DYNLT1P63172 113 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 TIAL1Q01085 375 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS41-203ENST00000395969 NME3Q13232 169 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PCLAFQ15004 111 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 MOGQ16653 247 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 NECAB2Q7Z6G3 386 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 LILRB2Q8N423 598 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 GALNT4Q8N4A0 578 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 CARNMT1Q8N4J0 409 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PPHLN1Q8NEY8 458 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 DLG3Q92796 817 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 TANKQ92844 425 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 TSPAN17Q96FV3 270 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 HMCESQ96FZ2 354 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 DEFB118Q96PH6 123 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 OLFM1Q99784 485 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PKP2Q99959 881 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 BRINP2Q9C0B6 783 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PAIP1Q9H074 479 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 RPF2Q9H7B2 306 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 CYP4F11Q9HBI6 524 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 PNPLA3Q9NST1 481 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 OXSMQ9NWU1 459 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 TRPM5Q9NZQ8 1165 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 EPS15L1Q9UBC2 864 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 SARDHQ9UL12 918 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 AGO1Q9UL18 857 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 APOBEC2Q9Y235 224 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 GINS2Q9Y248 185 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 ERGIC3Q9Y282 383 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 MYRFQ9Y2G1 1151 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 TIMM13Q9Y5L4 95 aaPredicted RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 NOX1Q9Y5S8 564 aa5.33□□□□□ -1.56
VPS41-203ENST00000395969 OAS3Q9Y6K5 1087 aaKnown RBP5.33□□□□□ -1.56
VPS41-203ENST00000395969 FAM47E-STBD1D6RA91 191 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 F5H5T6 163 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 RAMP2O60895 175 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 CSPG5O95196 566 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 ATE1O95260 518 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 KLKB1P03952 638 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 DCKP27707 260 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 MASP1P48740 699 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 IDH3AP50213 366 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 SERPINH1P50454 418 aaKnown RBP5.32□□□□□ -1.56
VPS41-203ENST00000395969 EPHB3P54753 998 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 RALGDSQ12967 914 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 ENPP2Q13822 863 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 ACAP2Q15057 778 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 CARTPTQ16568 116 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 PHKG1Q16816 387 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 PIGGQ5H8A4 983 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 MARC1Q5VT66 337 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 OGFOD2Q6N063 350 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 ERAP2Q6P179 960 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 TRMT10BQ6PF06 316 aaKnown RBP5.32□□□□□ -1.56
VPS41-203ENST00000395969 AFTPHQ6ULP2 937 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 NEK10Q6ZWH5 1172 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 LYSMD3Q7Z3D4 306 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 CILP2Q8IUL8 1156 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 MRPL43Q8N983 215 aaKnown RBP5.32□□□□□ -1.56
VPS41-203ENST00000395969 TSPEARQ8WU66 669 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 DEPDC1BQ8WUY9 529 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 TRUB1Q8WWH5 349 aaKnown RBP5.32□□□□□ -1.56
VPS41-203ENST00000395969 PAWRQ96IZ0 340 aaKnown RBP5.32□□□□□ -1.56
VPS41-203ENST00000395969 FAR2Q96K12 515 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 NSMCE3Q96MG7 304 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 ZNF641Q96N77 438 aaPredicted RBP5.32□□□□□ -1.56
VPS41-203ENST00000395969 SORT1Q99523 831 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 RAD9AQ99638 391 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 OSBPL11Q9BXB4 747 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 SHCBP1LQ9BZQ2 653 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 P2RY12Q9H244 342 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 COPS7BQ9H9Q2 264 aaPredicted RBP5.32□□□□□ -1.56
VPS41-203ENST00000395969 TMPRSS4Q9NRS4 437 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 RAD18Q9NS91 495 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 ATAD3AQ9NVI7 634 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 COPG2Q9UBF2 871 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 PTBP2Q9UKA9 531 aaKnown RBP5.32□□□□□ -1.56
VPS41-203ENST00000395969 SLC8A2Q9UPR5 921 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 BOLA1Q9Y3E2 137 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 TIMM22Q9Y584 194 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 CCDC195A0A1B0GUA6 201 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 TRIM49D1C9J1S8 452 aa5.32□□□□□ -1.56
VPS41-203ENST00000395969 H3BMQ9 156 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms