RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 KCNU1A8MYU2 1149 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 POP4O95707 220 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SLC35G6P0C7Q6 338 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CLCNKBP51801 687 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PRMT2P55345 433 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 AP3S2P59780 193 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 STXBP1P61764 594 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SEMA5AQ13591 1074 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 UGCGQ16739 394 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PGAM4Q8N0Y7 254 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 MTMR14Q8NCE2 650 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF483Q8TF39 744 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 NKD2Q969F2 451 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 QKIQ96PU8 341 aaKnown RBP eCLIP5.42□□□□□ -1.542e-7■■■■■ 34.6
VPS13C-204ENST00000395898 B3GNT5Q9BYG0 378 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 NMUR1Q9HB89 426 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SLCO1B3Q9NPD5 702 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 EIF2B3Q9NR50 452 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 DNAJC28Q9NX36 388 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 NUDT4Q9NZJ9 180 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 DRD4P21917 467 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CTSKP43235 329 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SLC7A2P52569 658 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 MYBPC3Q14896 1274 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ATAT1Q5SQI0 421 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CERCAMQ5T4B2 595 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PLPP4Q5VZY2 271 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 MED27Q6P2C8 311 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ZYG11AQ6WRX3 759 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 LRRC17Q8N6Y2 441 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PLD5Q8N7P1 536 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 FZD1Q9UP38 647 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 GPC6Q9Y625 555 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SMIM28A0A1B0GU29 152 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PRAMEF1O95521 474 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 HNF4AP41235 474 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 MARCKSL1P49006 195 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 AP1S1P61966 158 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 GNA12Q03113 381 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CCNIQ14094 377 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 KCNA10Q16322 511 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CCDC80Q76M96 950 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ALYREFQ86V81 257 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ZBTB2Q8N680 514 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 POC5Q8NA72 575 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 FAM98AQ8NCA5 519 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PLEKHG4BQ96PX9 1271 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 NTPCRQ9BSD7 190 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CALML5Q9NZT1 146 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 MRPS7Q9Y2R9 242 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SLIT2O94813 1529 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TEX46H3BTG2 121 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CDK14O94921 469 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 LAMP2P13473 410 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 LIMK2P53671 638 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CAMK1Q14012 370 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 HNRNPDQ14103 355 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 VPS26BQ4G0F5 336 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 FNBP1LQ5T0N5 605 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 C7orf26Q96N11 449 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PURBQ96QR8 312 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SMURF2Q9HAU4 748 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 DNAJC11Q9NVH1 559 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 POLR3HQ9Y535 204 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 MRPL42Q9Y6G3 142 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 UBR2Q8IWV8 1755 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 FAM92AA1XBS5 289 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 LOC110117498-PIK3R3F6TDL0 507 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SLC22A2O15244 555 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 IRAK2O43187 625 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TREHO43280 583 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PLOD3O60568 738 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 OR5F1O95221 314 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ABCG1P45844 678 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 BLKP51451 505 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 RNASEH2BQ5TBB1 312 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 DEF8Q6ZN54 512 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 OR2T34Q8NGX1 318 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 OR2T3Q8NH03 318 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 OR4C6Q8NH72 309 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TWIST2Q8WVJ9 160 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 OMA1Q96E52 524 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF514Q96K75 400 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 KREMEN1Q96MU8 473 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 GAS2L1Q99501 681 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 IL1RAPQ9NPH3 570 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ERVW-1Q9UQF0 538 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SETD1AO15047 1707 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 NFAT5O94916 1531 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 A0A1W2PQ72 361 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 NT5C1B-RDH14C9J2C7 533 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CASKO14936 926 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 GSC2O15499 205 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 DHFRP00374 187 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 IDSP22304 550 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 MNDAP41218 407 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PTGER3P43115 390 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 IL10RBQ08334 325 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PPIGQ13427 754 aaKnown RBP eCLIP5.42□□□□□ -1.549e-7■■□□□ 14.5
VPS13C-204ENST00000395898 MTX3Q5HYI7 312 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms