RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 GRXCR2A6NFK2 248 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SLC28A1O00337 649 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FFAR2O15552 330 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 VEGFDO43915 354 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 KLHL41O60662 606 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SKAP2O75563 359 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 KRT75O95678 551 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FYNP06241 537 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CSF2RAP15509 400 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ALOX15P16050 662 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 IMPDH1P20839 514 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 BGNP21810 368 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 BMPR2Q13873 1038 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PGAM4Q8N0Y7 254 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DIS3LQ8TF46 1054 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ALG9Q9H6U8 611 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 COG4Q9H9E3 785 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 COPS7BQ9H9Q2 264 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HS3ST2Q9Y278 367 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 NEDD8-MDP1E9PL57 170 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 H0Y3Z8 333 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TULP3O75386 442 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 GPIP06744 558 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 RPS24P62847 133 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SEMA3BQ13214 749 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 GPM6BQ13491 265 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ZCCHC8Q6NZY4 707 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CLEC4FQ8N1N0 589 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 MRPL43Q8N983 215 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ELMO1Q92556 727 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 RIT1Q92963 219 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 C19orf60Q96EN9 201 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CPEB1Q9BZB8 566 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 POLMQ9NP87 494 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 STX18Q9P2W9 335 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HAO1Q9UJM8 370 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 AURKCQ9UQB9 309 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ST14Q9Y5Y6 855 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 H0Y858 1186 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 H3BNX3 289 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 STC2O76061 302 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ALBP02768 609 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 UGT2B4P06133 528 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SMIM11AP58511 58 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FOXM1Q08050 763 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ERICH5Q6P6B1 374 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PTGR2Q8N8N7 351 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 NELL2Q99435 816 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SYBUQ9NX95 663 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 MAGEL2Q9UJ55 1249 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 NUDT5Q9UKK9 219 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DENND4CQ5VZ89 1909 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 A0A0C4DFX4 3053 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ANKDD1BA6NHY2 528 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 OR5K4A6NMS3 321 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 AKAP10O43572 662 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 VEGFBP49765 207 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 GRSF1Q12849 480 aaKnown RBP eCLIP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FASTKD3Q14CZ7 662 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TRIP10Q15642 601 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FNDC3BQ53EP0 1204 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HECTD2Q5U5R9 776 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PPP2R2DQ66LE6 453 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TRIM68Q6AZZ1 485 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF438Q7Z4V0 828 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SETD9Q8NE22 299 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 BHMTQ93088 406 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SLC39A13Q96H72 371 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 GAS2L1Q99501 681 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ALG13Q9NP73 1137 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ABCB8Q9NUT2 735 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FLRT1Q9NZU1 646 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SPASTQ9UBP0 616 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SAMD4AQ9UPU9 718 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CCDC195A0A1B0GUA6 201 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TULP2O00295 520 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SLC22A3O75751 556 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 NUP107P57740 925 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 MAXP61244 160 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SKIV2LQ15477 1246 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DLG2Q15700 870 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 AAK1Q2M2I8 961 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CERCAMQ5T4B2 595 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TXNRD3NBQ6F5E7 133 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CXorf40AQ8TE69 158 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ZBTB10Q96DT7 871 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ZFRQ96KR1 1074 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HERC2P3Q9BVR0 1158 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CEP41Q9BYV8 373 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 NEUROG2Q9H2A3 272 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 NEUROD4Q9HD90 331 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SELENONQ9NZV5 590 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TBX21Q9UL17 535 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 RANBP2P49792 3224 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ANAPC1Q9H1A4 1944 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DRGXA6NNA5 263 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PPEF2O14830 753 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ERN1O75460 977 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PDE9AO76083 593 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ADH5P11766 374 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms