RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 ARL1P40616 181 aaPredicted RBP16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 SERPINH1P50454 418 aaKnown RBP16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 POLR2JP52435 117 aaKnown RBP16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 VGLL4Q14135 290 aa16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 RBM48Q5RL73 367 aaKnown RBP16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 TMEM236Q5W0B7 351 aa16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 UTS2BQ765I0 119 aa16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 CHDHQ8NE62 594 aaPredicted RBP16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 ZNF555Q8NEP9 628 aa16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 OR7A2PQ8NGA2 310 aa16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 NDNFQ8TB73 568 aa16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 ESAMQ96AP7 390 aa16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 WDR12Q9GZL7 423 aaKnown RBP16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 SIAEQ9HAT2 523 aa16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 FAM118AQ9NWS6 357 aa16.3■□□□□ 0.2
EFEMP1-202ENST00000394555 FGF4P08620 206 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 PRKACGP22612 351 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 PNPLA4P41247 253 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 CHRNB3Q05901 458 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 RCAN2Q14206 197 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 SELPLGQ14242 412 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 MAPRE1Q15691 268 aaKnown RBP16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 MARCH8Q5T0T0 291 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 CCDC80Q76M96 950 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 DTWD1Q8N5C7 304 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 FAM86B1Q8N7N1 296 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 ZMIZ2Q8NF64 920 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 FIG4Q92562 907 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 PCED1BQ96HM7 432 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 KLQ9UEF7 1012 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 ENPP5Q9UJA9 477 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 LEF1Q9UJU2 399 aaPredicted RBP16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 CD86P42081 329 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 EEFSECP57772 596 aaKnown RBP16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 CD47Q08722 323 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 CTF1Q16619 201 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 PM20D1Q6GTS8 502 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 RBM23Q86U06 439 aaKnown RBP16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 ANKRD13BQ86YJ7 626 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 MUC13Q9H3R2 512 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 NT5MQ9NPB1 228 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 AKIP1Q9NQ31 210 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 CNGB3Q9NQW8 809 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 NUDT5Q9UKK9 219 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 XPNPEP2O43895 674 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 CAPN15O75808 1086 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 CDH1P12830 882 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 VBP1P61758 197 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 DGCR6Q14129 220 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 BCL2A1Q16548 175 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 FAM98BQ52LJ0 330 aaKnown RBP16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 ADCK1Q86TW2 530 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 SLC22A16Q86VW1 577 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 RIMKLAQ8IXN7 391 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 TMEM199Q8N511 208 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 HDAC2Q92769 488 aaKnown RBP16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 ITCHQ96J02 903 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 KLHL5Q96PQ7 755 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 NODALQ96S42 347 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 HBEGFQ99075 208 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 AMBRA1Q9C0C7 1298 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 AASSQ9UDR5 926 aa16.29■□□□□ 0.2
EFEMP1-202ENST00000394555 PFDN6O15212 129 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 NDUFS2O75306 463 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 UGT2B11O75310 529 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 MTHFD2P13995 350 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 WARSP23381 471 aaKnown RBP16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 CCR1P32246 355 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 GP2P55259 537 aaKnown RBP16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 TTC23Q5W5X9 447 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 SPESP1Q6UW49 350 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 PROSER1Q86XN7 944 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 ARL10Q8N8L6 244 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 TBATAQ96M53 351 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 DNMT3BQ9UBC3 853 aaKnown RBP16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 UTS2RQ9UKP6 389 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 SYCE1LA8MT33 242 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 LSM1O15116 133 aaKnown RBP16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 HS6ST1O60243 411 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 IL12AP29459 219 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 NKX2-5P52952 324 aaPredicted RBP16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 KCNAB2Q13303 367 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 SLC14A2Q15849 920 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 PHKG1Q16816 387 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 CCDC81Q6ZN84 652 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 NANOGNBQ7Z5D8 188 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 SCML4Q8N228 414 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 LRRC3Q9BY71 257 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 U3KQV3 271 aa16.28■□□□□ 0.2
EFEMP1-202ENST00000394555 ENPP3O14638 875 aa16.27■□□□□ 0.2
EFEMP1-202ENST00000394555 MSI1O43347 362 aaKnown RBP16.27■□□□□ 0.2
EFEMP1-202ENST00000394555 SNX2O60749 519 aa16.27■□□□□ 0.2
EFEMP1-202ENST00000394555 EEDO75530 441 aaKnown RBP16.27■□□□□ 0.2
EFEMP1-202ENST00000394555 BMP4P12644 408 aa16.27■□□□□ 0.2
EFEMP1-202ENST00000394555 HTR1EP28566 365 aa16.27■□□□□ 0.2
EFEMP1-202ENST00000394555 GSSP48637 474 aa16.27■□□□□ 0.2
EFEMP1-202ENST00000394555 CBX2Q14781 532 aaPredicted RBP16.27■□□□□ 0.2
EFEMP1-202ENST00000394555 SF3B4Q15427 424 aaKnown RBP eCLIP16.27■□□□□ 0.2
EFEMP1-202ENST00000394555 DEPDC1Q5TB30 811 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms