RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 OTUD1Q5VV17 481 aaPredicted RBP16.01■□□□□ 0.15
PCDH1-203ENST00000394536 MFSD6LQ8IWD5 586 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 TMEM102Q8N9M5 508 aaPredicted RBP16.01■□□□□ 0.15
PCDH1-203ENST00000394536 RSPH1Q8WYR4 309 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 BORCS5Q969J3 196 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 PTERQ96BW5 349 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 ELOVL6Q9H5J4 265 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 MEAF6Q9HAF1 191 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 A0A0U1RQS6 177 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 F8W810 466 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 B4GAT1O43505 415 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 S1PR4O95977 384 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 THRBP10828 461 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 PRKACGP22612 351 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 ELK4P28324 431 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 OXTRP30559 389 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 ATP6V0D1P61421 351 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 DUSP4Q13115 394 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 UBXN11Q5T124 520 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 FAM117BQ6P1L5 589 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 OR10T2Q8NGX3 314 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 KCNN1Q92952 543 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 MUS81Q96NY9 551 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 TSSK3Q96PN8 268 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 TSGA13Q96PP4 275 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 IL12RB2Q99665 862 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 HPS4Q9NQG7 708 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 INTS7Q9NVH2 962 aaKnown RBP16.01■□□□□ 0.15
PCDH1-203ENST00000394536 RNF11Q9Y3C5 154 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 IQCA1LA6NCM1 817 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 RAD51BO15315 384 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 ULK1O75385 1050 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 NDST3O95803 873 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 AKR1A1P14550 325 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 IL7RP16871 459 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 SEMG2Q02383 582 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 CDH18Q13634 790 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 GRM2Q14416 872 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 AARS2Q5JTZ9 985 aaKnown RBP16.01■□□□□ 0.15
PCDH1-203ENST00000394536 CRTC3Q6UUV7 619 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 FAM151BQ6UXP7 276 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 RETREG3Q86VR2 466 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 TMEM126BQ8IUX1 230 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 BRSK1Q8TDC3 778 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 BTN2A3PQ96KV6 586 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 MFSD1Q9H3U5 465 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 TNFRSF12AQ9NP84 129 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 OLA1Q9NTK5 396 aaKnown RBP16.01■□□□□ 0.15
PCDH1-203ENST00000394536 CCM2LQ9NUG4 571 aaPredicted RBP16.01■□□□□ 0.15
PCDH1-203ENST00000394536 OPTCQ9UBM4 332 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 NTRK1P04629 796 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 HSMCR30P0CW71 290 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 RPS24P62847 133 aaKnown RBP16■□□□□ 0.15
PCDH1-203ENST00000394536 BIRC7Q96CA5 298 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 TPD52L3Q96J77 140 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 CEP19Q96LK0 163 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 BOLA2-SMG1P6H3BVE0 249 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 GJB3O75712 270 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 LEPRP48357 1165 aaKnown RBP16■□□□□ 0.15
PCDH1-203ENST00000394536 IST1P53990 364 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 HMGCS1Q01581 520 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 CREB5Q02930 508 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 PPP4R4Q6NUP7 873 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 ZNF621Q6ZSS3 439 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 OR7A2PQ8NGA2 310 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 OR52E6Q96RD3 313 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 GSTO2Q9H4Y5 243 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 ASB8Q9H765 288 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 IPPKQ9H8X2 491 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 CEPT1Q9Y6K0 416 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 UTRNP46939 3433 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 XPAP23025 273 aaPredicted RBP16■□□□□ 0.15
PCDH1-203ENST00000394536 OR4D1Q15615 310 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 FGD3Q5JSP0 725 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 CCNYL2Q5T2Q4 361 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 AFTPHQ6ULP2 937 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 THAP5Q7Z6K1 395 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 TERB1Q8NA31 727 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 TOP1MTQ969P6 601 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 SMURF2Q9HAU4 748 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 RASSF1Q9NS23 344 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 ACTL7AQ9Y615 435 aa16■□□□□ 0.15
PCDH1-203ENST00000394536 SBK3P0C264 359 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 PBX3P40426 434 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 ARCN1P48444 511 aaKnown RBP15.99■□□□□ 0.15
PCDH1-203ENST00000394536 APLP1P51693 650 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 PM20D1Q6GTS8 502 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 AGMOQ6ZNB7 445 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 SZRD1Q7Z422 152 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 EXOSC4Q9NPD3 245 aaKnown RBP15.99■□□□□ 0.15
PCDH1-203ENST00000394536 AGO1Q9UL18 857 aaKnown RBP15.99■□□□□ 0.15
PCDH1-203ENST00000394536 TBC1D30Q9Y2I9 924 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 A0A1W2PP18 115 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 ZNF37AP17032 561 aaPredicted RBP15.99■□□□□ 0.15
PCDH1-203ENST00000394536 S100A3P33764 101 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 TTPAP49638 278 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 HSPA14Q0VDF9 509 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 LAPTM4AQ15012 233 aa15.99■□□□□ 0.15
PCDH1-203ENST00000394536 FAM174BQ3ZCQ3 159 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms