RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 TECTAO75443 2155 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 SLC35E2BP0CK96 405 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 RPA3P35244 121 aaPredicted RBP23.05■■□□□ 1.28
CNN3-202ENST00000394202 ADARP55265 1226 aaKnown RBP23.05■■□□□ 1.28
CNN3-202ENST00000394202 SIGLEC14Q08ET2 396 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 CWF19L1Q69YN2 538 aaKnown RBP23.05■■□□□ 1.28
CNN3-202ENST00000394202 RAET1GQ6H3X3 334 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 TRIM74Q86UV6 250 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 HORMAD1Q86X24 394 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 RBFAQ8N0V3 343 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 PLD6Q8N2A8 252 aaKnown RBP23.05■■□□□ 1.28
CNN3-202ENST00000394202 FAM160A2Q8N612 972 aaPredicted RBP23.05■■□□□ 1.28
CNN3-202ENST00000394202 GDAP1Q8TB36 358 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 RLN3Q8WXF3 142 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 GLYATL1Q969I3 302 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 TTC28Q96AY4 2481 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 COPS8Q99627 209 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 SLC17A9Q9BYT1 436 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 BTBD1Q9H0C5 482 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 VPS11Q9H270 941 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 PREBQ9HCU5 417 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 ZNF358Q9NW07 568 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 VPS9D1Q9Y2B5 631 aa23.05■■□□□ 1.28
CNN3-202ENST00000394202 USP34Q70CQ2 3546 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 A0A096LPK6 155 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 RAD51BO15315 384 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 PKMP14618 531 aaKnown RBP23.04■■□□□ 1.28
CNN3-202ENST00000394202 STMN1P16949 149 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 ZNF7P17097 686 aaPredicted RBP23.04■■□□□ 1.28
CNN3-202ENST00000394202 GPR1P46091 355 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 RAB10P61026 200 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 LYPLAL1Q5VWZ2 237 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 KIAA1161Q6NSJ0 714 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 TMEM207Q6UWW9 146 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 FAM76AQ8TAV0 307 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 EDAQ92838 391 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 ULK4Q96C45 1275 aa23.04■■□□□ 1.28
CNN3-202ENST00000394202 LENG8Q96PV6 779 aaPredicted RBP23.04■■□□□ 1.28
CNN3-202ENST00000394202 PFDN6O15212 129 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 FDXRP22570 491 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 AGERQ15109 404 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 RAPH1Q70E73 1250 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 SPATA6LQ8N4H0 392 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 VPS35Q96QK1 796 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 TTC1Q99614 292 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 SLC30A3Q99726 388 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 CLPBQ9H078 707 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 MLXIPLQ9NP71 852 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 FZD3Q9NPG1 666 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 DLGAP2Q9P1A6 1054 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 SLC25A14O95258 325 aaPredicted RBP23.03■■□□□ 1.28
CNN3-202ENST00000394202 IGLV3-19P01714 112 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 PCCBP05166 539 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 PPARGP37231 505 aaPredicted RBP23.03■■□□□ 1.28
CNN3-202ENST00000394202 POLD2P49005 469 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 TJAP1Q5JTD0 557 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 FAM45BPQ6NSW5 357 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 PNCKQ6P2M8 343 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 DET1Q7L5Y6 550 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 NLRP8Q86W28 1048 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 ANKRD42Q8N9B4 389 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 TP53I13Q8NBR0 393 aaPredicted RBP23.03■■□□□ 1.28
CNN3-202ENST00000394202 DDHD1Q8NEL9 900 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 FAM45AQ8TCE6 357 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 LKAAEAR1Q8TD35 194 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 ACMSDQ8TDX5 336 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 TOE1Q96GM8 510 aaKnown RBP23.03■■□□□ 1.28
CNN3-202ENST00000394202 SLC17A7Q9P2U7 560 aa23.03■■□□□ 1.28
CNN3-202ENST00000394202 CORO1CQ9ULV4 474 aaPredicted RBP23.03■■□□□ 1.28
CNN3-202ENST00000394202 SLC31A1O15431 190 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 ESR1P03372 595 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 SFSWAPQ12872 951 aaKnown RBP23.02■■□□□ 1.28
CNN3-202ENST00000394202 SGCGQ13326 291 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 ITIH4Q14624 930 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 LRRC14Q15048 493 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 TCP10LQ8TDR4 215 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 CENPTQ96BT3 561 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 SGF29Q96ES7 293 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 APOPT1Q96IL0 206 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 UNKQ9C0B0 810 aaKnown RBP23.02■■□□□ 1.28
CNN3-202ENST00000394202 CCDC68Q9H2F9 335 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 KDM4CQ9H3R0 1056 aa23.02■■□□□ 1.28
CNN3-202ENST00000394202 OAS3Q9Y6K5 1087 aaKnown RBP23.02■■□□□ 1.28
CNN3-202ENST00000394202 COPEO14579 308 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 PRPF4O43172 522 aaKnown RBP eCLIP23.01■■□□□ 1.27
CNN3-202ENST00000394202 RHOBTB1O94844 696 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 RPS3P23396 243 aaKnown RBP eCLIP23.01■■□□□ 1.271e-10■□□□□ 10.3
CNN3-202ENST00000394202 AKT1P31749 480 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 NSG1P42857 185 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 SLC12A2P55011 1212 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 IRF4Q15306 451 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 NEK5Q6P3R8 708 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.01■■□□□ 1.27
CNN3-202ENST00000394202 CENPLQ8N0S6 344 aaPredicted RBP23.01■■□□□ 1.27
CNN3-202ENST00000394202 OR2T34Q8NGX1 318 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 ANKRD49Q8WVL7 239 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 GPR21Q99679 349 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 MYOCQ99972 504 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 LGR4Q9BXB1 951 aa23.01■■□□□ 1.27
CNN3-202ENST00000394202 SGK2Q9HBY8 427 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms