RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 CD84Q9UIB8 345 aa18.66■□□□□ 0.58
SMARCC2-203ENST00000394023 MYOCOSA0A1B0GUC4 107 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 UGT2B4P06133 528 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 FOXA1P55317 472 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 RING1Q06587 406 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 ACBD5Q5T8D3 534 aaPredicted RBP18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 CD300LGQ6UXG3 332 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.65■□□□□ 0.585e-10■■■■■ 38
SMARCC2-203ENST00000394023 PDSS2Q86YH6 399 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 SCML4Q8N228 414 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 SMG9Q9H0W8 520 aaKnown RBP18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 WARS2Q9UGM6 360 aaKnown RBP18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 SQORQ9Y6N5 450 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 KDELR3O43731 214 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 DGKAP23743 735 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 AP5B1Q2VPB7 878 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 ZIK1Q3SY52 487 aaPredicted RBP18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 BNIPLQ7Z465 357 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 ADAMTSL2Q86TH1 951 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 CNTN4Q8IWV2 1026 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 FBXO30Q8TB52 745 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 ZNF599Q96NL3 588 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 INTS10Q9NVR2 710 aaKnown RBP18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 DNAJC15Q9Y5T4 150 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 PTPRFP10586 1907 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 LINGO3P0C6S8 592 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 MTHFD1P11586 935 aaKnown RBP18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 MANEALQ5VSG8 457 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 CPSF7Q8N684 471 aaKnown RBP18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 PLD4Q96BZ4 506 aa18.65■□□□□ 0.58
SMARCC2-203ENST00000394023 CFAP99D6REC4 459 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 ZNF195O14628 629 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 VPS4BO75351 444 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 EPOP01588 193 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 MAGEA12P43365 314 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 CHRNB3Q05901 458 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 LINC01599Q8WXQ3 324 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 TCF12Q99081 682 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 SLC25A13Q9UJS0 675 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 ORC6Q9Y5N6 252 aa18.64■□□□□ 0.58
SMARCC2-203ENST00000394023 KERAO60938 352 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 ACRP10323 421 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 ATF6P18850 670 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 TM4SF4P48230 202 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 SATB1Q01826 763 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 PRMT9Q6P2P2 845 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 PIANPQ8IYJ0 282 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 FIBCD1Q8N539 461 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 ADCY4Q8NFM4 1077 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 RGPD3A6NKT7 1758 aaPredicted RBP18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 RGPD4Q7Z3J3 1758 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 ULK1O75385 1050 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 CLDN7O95471 211 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 LIMD1Q9UGP4 676 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 GNPTGQ9UJJ9 305 aa18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 LEF1Q9UJU2 399 aaPredicted RBP18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 TNPO3Q9Y5L0 923 aaKnown RBP18.64■□□□□ 0.57
SMARCC2-203ENST00000394023 CCDC189A1A4V9 331 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 ATXN1LP0C7T5 689 aaKnown RBP18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 SEMA3AQ14563 771 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 HERC3Q15034 1050 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 RBFAQ8N0V3 343 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 SLAIN1Q8ND83 568 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 C3orf30Q96M34 536 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 SPG21Q9NZD8 308 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 ZNF711Q9Y462 761 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 A0A1W2PRU2 124 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 MYO1GB0I1T2 1018 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 ALBP02768 609 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 TXNDC11Q6PKC3 985 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 ARNT2Q9HBZ2 717 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 PLXNB2O15031 1838 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 GLYATL1P3A0A0U1RQE8 302 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 LRATO95237 230 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 SBK3P0C264 359 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 ALOX15P16050 662 aaPredicted RBP18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 IRX1P78414 480 aaPredicted RBP18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 CACNG1Q06432 222 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 TRAF2Q12933 501 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 LIN52Q52LA3 116 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 STK32CQ86UX6 486 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 SATL1Q86VE3 508 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 CACUL1Q86Y37 369 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 KIAA1191Q96A73 305 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 CASD1Q96PB1 797 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 GSTO2Q9H4Y5 243 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 CLOCKO15516 846 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 POLR2JP52435 117 aaKnown RBP18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 GTF2H3Q13889 308 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 RABL3Q5HYI8 236 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 ZNF697Q5TEC3 545 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 OR2T34Q8NGX1 318 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 OR2T3Q8NH03 318 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 SELENOMQ8WWX9 145 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 ISL2Q96A47 359 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 RMND5BQ96G75 393 aaPredicted RBP18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 RNF38Q9H0F5 515 aa18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 NLE1Q9NVX2 485 aaPredicted RBP18.63■□□□□ 0.57
SMARCC2-203ENST00000394023 PDLIM1O00151 329 aa18.62■□□□□ 0.57
SMARCC2-203ENST00000394023 LDLRP01130 860 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms