RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 DNAJC1Q96KC8 554 aaKnown RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 PLEKHG4BQ96PX9 1271 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 FRMD8P1Q9BZ68 369 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 FOXP3Q9BZS1 431 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 LRRC40Q9H9A6 602 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 PRDM8Q9NQV8 689 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 RAB6BQ9NRW1 208 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 RAD18Q9NS91 495 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 NCKIPSDQ9NZQ3 722 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 HACD3Q9P035 362 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 VPS18Q9P253 973 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 TBC1D29Q9UFV1 150 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 SLC23A2Q9UGH3 650 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 ATXN7L1Q9ULK2 861 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 DNAJC16Q9Y2G8 782 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CABIN1Q9Y6J0 2220 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZZEF1O43149 2961 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 SCN8AQ9UQD0 1980 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 TDRD6O60522 2096 aaKnown RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 PRAMEF33A0A0G2JMD5 474 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 A0A1W2PNU3 283 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 OR51F1A6NGY5 319 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 OR2AG2A6NM03 316 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 C2orf81A6NN90 581 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 E7EVH7 732 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 TAF4O00268 1085 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 PPM1DO15297 605 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZSCAN12O43309 604 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 KIF5CO60282 957 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 SRP72O76094 671 aaKnown RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 CDK14O94921 469 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 PROS1P07225 676 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 PBLDP30039 288 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 AKT1P31749 480 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 MC4RP32245 332 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 CDKN1CP49918 316 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 ARSDP51689 593 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 OR1D5P58170 312 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 XIAPP98170 497 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 CYP4F3Q08477 520 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 TMEM115Q12893 351 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 SEMA5AQ13591 1074 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 PEX6Q13608 980 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 INSCQ1MX18 579 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 AMZ1Q400G9 498 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 NKAIN2Q5VXU1 208 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 PDPK2PQ6A1A2 396 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 PPP1R21Q6ZMI0 780 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 GSTA5Q7RTV2 222 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 TMPRSS9Q7Z410 1059 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 SPRED1Q7Z699 444 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 B3GNT8Q7Z7M8 397 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 TRAPPC5Q8IUR0 188 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 CCNJLQ8IV13 435 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 BEND7Q8N7W2 519 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 RASGEF1AQ8N9B8 481 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 DNAAF3Q8N9W5 541 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZNF398Q8TD17 642 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 BRSK1Q8TDC3 778 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 SLC37A2Q8TED4 501 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 NAT6Q93015 286 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 ATXN7L3BQ96GX2 97 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 VPS35Q96QK1 796 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 SRPK1Q96SB4 655 aaKnown RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 OSBPL9Q96SU4 736 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 OSGEPL1Q9H4B0 414 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 ASB8Q9H765 288 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 TRIM39Q9HCM9 518 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 KLC4Q9NSK0 619 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 EVA1BQ9NVM1 165 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 SCHIP1Q9P0W5 487 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 PAK5Q9P286 719 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 LRIT1Q9P2V4 623 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 FAM8A1Q9UBU6 413 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 SLC2A6Q9UGQ3 507 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 TTC7AQ9ULT0 858 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 JRKLQ9Y4A0 524 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 PCNX2A6NKB5 2137 aa7.57□□□□□ -1.2
HMGB3P1-201ENST00000393368 TCRBV7S3A2A0A539 114 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 A6NCN8 305 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 RHPN2P1A8MT19 583 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 NTN3O00634 580 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 CHUKO15111 745 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 FANCGO15287 622 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 B4GAT1O43505 415 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZNF189O75820 626 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 CRTAMO95727 393 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 CAPNS1P04632 268 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 MPOP05164 745 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 APRTP07741 180 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 CDK4P11802 303 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 GLB1P16278 677 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 MPSTP25325 297 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 RPL10P27635 214 aaKnown RBP7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 ALDH4A1P30038 563 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 STIP1P31948 543 aaKnown RBP7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 ACTN2P35609 894 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 FDFT1P37268 417 aa7.56□□□□□ -1.2
HMGB3P1-201ENST00000393368 DRG2P55039 364 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms