RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 PITX1P78337 314 aaPredicted RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 MRPL49Q13405 166 aaKnown RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 SEMA5AQ13591 1074 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 CUL4AQ13619 759 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 IL11RAQ14626 422 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 ACOX1Q15067 660 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 FXNQ16595 210 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 INO80DQ53TQ3 878 aaPredicted RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 ATXN7L2Q5T6C5 722 aaPredicted RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 ATP1A1-AS1Q5TC04 95 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 DNAAF5Q86Y56 855 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 IQCKQ8N0W5 287 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 LZTR1Q8N653 840 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 UBR7Q8N806 425 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 PDCD6IPQ8WUM4 868 aaKnown RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 FUBP1Q96AE4 644 aaKnown RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 INTS4Q96HW7 963 aaKnown RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 GPR87Q9BY21 358 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.83□□□□□ -1.16
CASP4-201ENST00000393150 FGF22Q9HCT0 170 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 UBE2TQ9NPD8 197 aaPredicted RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 PCDH12Q9NPG4 1184 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 PIGVQ9NUD9 493 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 SPATS2LQ9NUQ6 558 aaKnown RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 GOLGA6AQ9NYA3 693 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 SUCOQ9UBS9 1254 aaKnown RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 LNPEPQ9UIQ6 1025 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 CROTQ9UKG9 612 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 ATP8A1Q9Y2Q0 1164 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 MFHAS1Q9Y4C4 1052 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 COL27A1Q8IZC6 1860 aaPredicted RBP7.83□□□□□ -1.16
CASP4-201ENST00000393150 ZFHX3Q15911 3703 aa7.83□□□□□ -1.16
CASP4-201ENST00000393150 IGLV3-10A0A075B6K4 115 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 ANKUB1A6NFN9 424 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 WIPF3A6NGB9 483 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 KDELR3O43731 214 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 RECQL5O94762 991 aaPredicted RBP7.82□□□□□ -1.16
CASP4-201ENST00000393150 TMCC1O94876 653 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 F13BP05160 661 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 H2AFB1P0C5Y9 115 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 H2AFB2P0C5Z0 115 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 MYCLP1P12525 358 aaPredicted RBP7.82□□□□□ -1.16
CASP4-201ENST00000393150 SERPINA4P29622 427 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 ACTR1BP42025 376 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 MAPK9P45984 424 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 ACTR1AP61163 376 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 LRRC63Q05C16 580 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 SLC25A52Q3SY17 297 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 NADK2Q4G0N4 442 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 ANKRD40Q6AI12 368 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 PNCKQ6P2M8 343 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 VHLLQ6RSH7 139 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 SLC26A9Q7LBE3 791 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 MCEMP1Q8IX19 187 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 HDAC11Q96DB2 347 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 PGAP3Q96FM1 320 aaPredicted RBP7.82□□□□□ -1.16
CASP4-201ENST00000393150 KREMEN1Q96MU8 473 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 SPOCK3Q9BQ16 436 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 ATP13A3Q9H7F0 1226 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 AGPAT4Q9NRZ5 378 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 DNAI1Q9UI46 699 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 HOOK1Q9UJC3 728 aaKnown RBP7.82□□□□□ -1.16
CASP4-201ENST00000393150 ERRFI1Q9UJM3 462 aaPredicted RBP7.82□□□□□ -1.16
CASP4-201ENST00000393150 ITGB1BP2Q9UKP3 347 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 MRPS18BQ9Y676 258 aaKnown RBP7.82□□□□□ -1.16
CASP4-201ENST00000393150 HIVEP3Q5T1R4 2406 aa7.82□□□□□ -1.16
CASP4-201ENST00000393150 K7ELQ4 463 aaPredicted RBP7.81□□□□□ -1.16
CASP4-201ENST00000393150 K7EM74 188 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 CLEC3AO75596 197 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 NDUFA10O95299 355 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 ALPPP05187 535 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 DESP17661 470 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 CMA1P23946 247 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 TRIM23P36406 574 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 ACVRL1P37023 503 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 DNASE1L3Q13609 305 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 ZCWPW2Q504Y3 356 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 LYPLAL1Q5VWZ2 237 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 SP5Q6BEB4 398 aaPredicted RBP7.81□□□□□ -1.16
CASP4-201ENST00000393150 JMJD6Q6NYC1 403 aaPredicted RBP7.81□□□□□ -1.16
CASP4-201ENST00000393150 FOXR2Q6PJQ5 311 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 KRBA2Q6ZNG9 492 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 FAM183BPQ6ZVS7 135 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 GDF7Q7Z4P5 450 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 ARHGAP22Q7Z5H3 698 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 SLC9B2Q86UD5 537 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 C17orf82Q86X59 251 aaPredicted RBP7.81□□□□□ -1.16
CASP4-201ENST00000393150 ZNF397Q8NF99 534 aaPredicted RBP7.81□□□□□ -1.16
CASP4-201ENST00000393150 CCL4L1Q8NHW4 92 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 SLC35C1Q96A29 364 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 PNPLA2Q96AD5 504 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 DHRS1Q96LJ7 313 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 TUBGCP5Q96RT8 1024 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 ZSWIM1Q9BR11 485 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 ING2Q9H160 280 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 PDE7BQ9NP56 450 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 PDP2Q9P2J9 529 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 CNOT8Q9UFF9 292 aaKnown RBP7.81□□□□□ -1.16
CASP4-201ENST00000393150 OR12D3Q9UGF7 316 aa7.81□□□□□ -1.16
CASP4-201ENST00000393150 A0A1B0GVL5 298 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms