RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ELF1P32519 619 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 CLK1P49759 484 aaKnown RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 BMXP51813 675 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 CTSCP53634 463 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 BRWD1-AS2P59051 145 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 KRTAP10-12P60413 245 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 RPS18P62269 152 aaKnown RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 BIRC3Q13489 604 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 KIR2DS5Q14953 304 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 RRS1Q15050 365 aaKnown RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 NAB2Q15742 525 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 CCNG2Q16589 344 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 BAK1Q16611 211 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 KIAA1644Q3SXP7 199 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 TUBB8Q3ZCM7 444 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 SLC9B1Q4ZJI4 515 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 ZC2HC1CQ53FD0 456 aaPredicted RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 NDUFAF5Q5TEU4 345 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 ARHGEF16Q5VV41 709 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 C18orf63Q68DL7 685 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 PAPD4Q6PIY7 484 aaKnown RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 TSSK4Q6SA08 328 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 LRRTM4Q86VH4 590 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 ZNF354CQ86Y25 554 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 ARMC8Q8IUR7 673 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 CCDC13Q8IYE1 715 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 HACE1Q8IYU2 909 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 SPAG16Q8N0X2 631 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 BEST3Q8N1M1 668 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 NKAPQ8N5F7 415 aaKnown RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 ANKRD42Q8N9B4 389 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 OR1J2Q8NGS2 313 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 NFKBIDQ8NI38 313 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 ZNF473Q8WTR7 871 aaKnown RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 TMEM190Q8WZ59 177 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 SUSD6Q92537 303 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 ZNF653Q96CK0 615 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 GCC1Q96CN9 775 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 ZNF689Q96CS4 500 aaPredicted RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 GRAMD2BQ96HH9 432 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 MAELQ96JY0 434 aaKnown RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 NUDCD1Q96RS6 583 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 RPS6KC1Q96S38 1066 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 RBM4BQ9BQ04 359 aaKnown RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 RHNO1Q9BSD3 238 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 DCTN5Q9BTE1 182 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 PHF7Q9BWX1 381 aaPredicted RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 MAGIXQ9H6Y5 334 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 ERVMER34-1Q9H9K5 563 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 KIF9Q9HAQ2 790 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 APOBEC3GQ9HC16 384 aaKnown RBP1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 BARHL2Q9NY43 387 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 FBXW11Q9UKB1 542 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 SLC13A4Q9UKG4 626 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 SARDHQ9UL12 918 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 KCNJ14Q9UNX9 436 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 YIPF1Q9Y548 306 aa1.23□□□□□ -2.21
SNORD28B-201ENST00000390993 STK36Q9NRP7 1315 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 IGLV7-46A0A075B6I9 117 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 TMEM178BH3BS89 294 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 H7C423 109 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ZBTB43O43298 467 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 GPR137BO60478 399 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 TMCC2O75069 709 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 DAB1O75553 588 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 SEC14L2O76054 403 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 IPO7O95373 1038 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 FTCDO95954 541 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 CLPTM1O96005 669 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 HIST1H2ABP04908 130 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 TFAP2AP05549 437 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 H1F0P07305 194 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 HNRNPA1P09651 372 aaKnown RBP eCLIP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 IGHV4-38-2P0DP08 117 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ERVK-10P10266 1014 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ACTN1P12814 892 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 TMEM11P17152 192 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 HIST1H2ADP20671 130 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 UGT1A1P22309 533 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ITGA3P26006 1051 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 EPHA2P29317 976 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 GGT5P36269 586 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 MAP2K2P36507 400 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 DCTP40126 519 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 PIK3CAP42336 1068 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 HALP42357 657 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 CLDN20P56880 219 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 GNB1P62873 340 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 MRPS5P82675 430 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 MBTD1Q05BQ5 628 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 GALNT2Q10471 571 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 FRG1Q14331 258 aaKnown RBP1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 FGFBP1Q14512 234 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ADIPOQQ15848 244 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 PNLIPRP3Q17RR3 467 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 SGSM1Q2NKQ1 1148 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 COL28A1Q2UY09 1125 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 GTDC1Q4AE62 458 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 KRTCAP3Q53RY4 240 aa1.22□□□□□ -2.21
SNORD28B-201ENST00000390993 ZDHHC20Q5W0Z9 365 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms