RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 DENND1BQ6P3S1 775 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 TMEM64Q6YI46 380 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 SLC16A9Q7RTY1 509 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 LONP2Q86WA8 852 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 SUGP1Q8IWZ8 645 aaKnown RBP1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 C17orf47Q8NEP4 570 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 HUS1BQ8NHY5 278 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 TMEM143Q96AN5 459 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 OXNAD1Q96HP4 312 aaPredicted RBP1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 MAGED4Q96JG8 741 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 BBS4Q96RK4 519 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 PUS3Q9BZE2 481 aaKnown RBP1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 VEZTQ9HBM0 779 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 APOBEC3GQ9HC16 384 aaKnown RBP1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 BPIFA1Q9NP55 256 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 SLC38A7Q9NVC3 462 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 BEX4Q9NWD9 120 aaPredicted RBP1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 ERAP1Q9NZ08 941 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 KLHL9Q9P2J3 617 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 THEGQ9P2T0 379 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 FBXL2Q9UKC9 423 aa1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 ZNF256Q9Y2P7 627 aaPredicted RBP1.09□□□□□ -2.23
RNU6-239P-201ENST00000390990 A0A1W2PP11 408 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 FAM90A7PA6NKC0 464 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 FAM90A22PA8MWA6 464 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 FAM90A12PA8MX19 464 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 FAM90A23PA8MXZ1 464 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 KPNA7A9QM74 516 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 STX16-NPEPL1H3BU86 382 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 IFNL4K9M1U5 179 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 STX16O14662 325 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZNF197O14709 1029 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 IRAK2O43187 625 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 MT-CYBP00156 380 aaPredicted RBP1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 S100BP04271 92 aaPredicted RBP1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 TFAP2AP05549 437 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 EPHA2P29317 976 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 TECP42680 631 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 SORDQ00796 357 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZNF766Q5HY98 468 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 NHLRC1Q6VVB1 395 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 ISCA2Q86U28 154 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 DCLK2Q8N568 766 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 OR6Y1Q8NGX8 325 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 SEMA4DQ92854 862 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 CNOT6LQ96LI5 555 aaKnown RBP1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 NSMCE3Q96MG7 304 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZIM3Q96PE6 472 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 SLX1AQ9BQ83 275 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 EIF2AK1Q9BQI3 630 aaKnown RBP1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 CLEC7AQ9BXN2 247 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 P2RY12Q9H244 342 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 KAT14Q9H8E8 782 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 CHODLQ9H9P2 273 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 B4GALT7Q9UBV7 327 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 TUBE1Q9UJT0 475 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 KIF25-AS1Q9Y6Z4 181 aa1.08□□□□□ -2.24
RNU6-239P-201ENST00000390990 PLK4O00444 970 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 HEXAP06865 529 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 MELTFP08582 738 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 FOLR2P14207 255 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 GP9P14770 177 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 BCL3P20749 454 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 NR2F2P24468 414 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 PDIA3P30101 505 aaKnown RBP1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 PPM1AP35813 382 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 APOBEC1P41238 236 aaKnown RBP1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 MCM2P49736 904 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 KRTAP10-10P60014 251 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZFP36L1Q07352 338 aaKnown RBP1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 NAE1Q13564 534 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 VEPH1Q14D04 833 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 P2RY6Q15077 328 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 PUM3Q15397 648 aaKnown RBP1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 TEAD2Q15562 447 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 HIGD2BQ4VC39 106 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZNF667Q5HYK9 610 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 CYP4A22Q5TCH4 519 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 PSRC1Q6PGN9 363 aaPredicted RBP1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 PACS1Q6VY07 963 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 ATG9AQ7Z3C6 839 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 TDRPQ86YL5 185 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 CCDC185Q8N715 623 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 ATG16L2Q8NAA4 619 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZNF527Q8NB42 609 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 KLHL30-AS1Q8NEE0 82 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 APBB2Q92870 758 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 SLITRK2Q9H156 845 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 PANK3Q9H999 370 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 GNB4Q9HAV0 340 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 MUTYHQ9UIF7 546 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZNF107Q9UII5 783 aaPredicted RBP1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 EXO1Q9UQ84 846 aaKnown RBP1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 ERVK-11Q9UQG0 969 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 TNNQ9UQP3 1299 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 WBP11Q9Y2W2 641 aaKnown RBP1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 FAM96BQ9Y3D0 163 aa1.07□□□□□ -2.24
RNU6-239P-201ENST00000390990 RABGAP1Q9Y3P9 1069 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms