RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 CCKBRP32239 447 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 SPAM1P38567 509 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 TNNT3P45378 269 aaPredicted RBP11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 PRPSAP1Q14558 356 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 PTPRCAPQ14761 206 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 RPS6KA1Q15418 735 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 CHRNA6Q15825 494 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 TBC1D25Q3MII6 688 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 IYDQ6PHW0 289 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 CHST15Q7LFX5 561 aaPredicted RBP11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 TMPRSS9Q7Z410 1059 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 GLT6D1Q7Z4J2 308 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 C11orf96Q7Z7L8 435 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 B3GNT8Q7Z7M8 397 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 PHYKPLQ8IUZ5 450 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 SLITRK4Q8IW52 837 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 SLC37A2Q8TED4 501 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 ATG4AQ8WYN0 398 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 FGF11Q92914 225 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 LIN37Q96GY3 246 aaPredicted RBP11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 GFM1Q96RP9 751 aaKnown RBP11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 TBL1YQ9BQ87 522 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 APOL2Q9BQE5 337 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 TMEM121Q9BTD3 319 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 GRPEL1Q9HAV7 217 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 SMOXQ9NWM0 555 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 PPP2R2CQ9Y2T4 447 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 PCDHGA8Q9Y5G5 932 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 ARL5AQ9Y689 179 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 AK5Q9Y6K8 562 aa11.25□□□□□ -0.61
IGHV4-28-201ENST00000390612 SEC16AO15027 2179 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 TMX2-CTNND1H3BSU7 103 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 KMOO15229 486 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 STX7O15400 261 aaKnown RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 LDB2O43679 373 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 BUD23O43709 281 aaKnown RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 UGT1A9O60656 530 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 MPOP05164 745 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 ACP5P13686 325 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 UGT1A6P19224 532 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 UGT1A1P22309 533 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 UGT1A4P22310 534 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 CD1CP29017 333 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 UGT1A3P35503 534 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 UGT1A5P35504 534 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZNF140P52738 457 aaPredicted RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 OR1D5P58170 312 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 ERVPABLB-1P60509 514 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 GABREP78334 506 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 XIAPP98170 497 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 CFHR1Q03591 330 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 TMEM115Q12893 351 aaPredicted RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 CLPPQ16740 277 aaPredicted RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 P3H1Q32P28 736 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 SEL1L2Q5TEA6 688 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 DRICH1Q6PGQ1 229 aaPredicted RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 LSMEM2Q8N112 164 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 Q8N9G6 341 aaPredicted RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 DDHD1Q8NEL9 900 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 OR4K2Q8NGD2 314 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 WDR36Q8NI36 951 aaKnown RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZNF578Q96N58 590 aaPredicted RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 SLC46A1Q96NT5 459 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 TIMM29Q9BSF4 260 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 UGT1A7Q9HAW7 530 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 UGT1A10Q9HAW8 530 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 UGT1A8Q9HAW9 530 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 LZTFL1Q9NQ48 299 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 ATXN7L1Q9ULK2 861 aaPredicted RBP11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 SATB2Q9UPW6 733 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 KCNK6Q9Y257 313 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 PKP3Q9Y446 797 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 KCTD3Q9Y597 815 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 SDK2Q58EX2 2172 aa11.24□□□□□ -0.61
IGHV4-28-201ENST00000390612 SMG1Q96Q15 3661 aaKnown RBP11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 IGHV1OR21-1A0A087WYE8 117 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 CCDC187A0A096LP49 1063 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 GLYATL1P3A0A0U1RQE8 302 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 PMS2P1A4D2B8 440 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 OR5K4A6NMS3 321 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 C2orf81A6NN90 581 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 RHPN2P1A8MT19 583 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 CDRT15L2A8MXV6 281 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 GPR39O43194 453 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 PSMD3O43242 534 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 MTX2O75431 263 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 CDK14O94921 469 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 CPNE6O95741 557 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 AP2A1O95782 977 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 F3P13726 295 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 ZNF7P17097 686 aaPredicted RBP11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 ACTN2P35609 894 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 EIF2S3P41091 472 aaKnown RBP11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 MLLT3P42568 568 aaPredicted RBP11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 UBE2IP63279 158 aaKnown RBP11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 ITGA9Q13797 1035 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 SPARCL1Q14515 664 aa11.23□□□□□ -0.61
IGHV4-28-201ENST00000390612 CCNG2Q16589 344 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms