RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 ARL8BQ9NVJ2 186 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DDX18Q9NVP1 670 aaKnown RBP-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NLE1Q9NVX2 485 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NDE1Q9NXR1 346 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CHPF2Q9P2E5 772 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 LEF1Q9UJU2 399 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PRDM4Q9UKN5 801 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SPG7Q9UQ90 795 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SOX21Q9Y651 276 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 POMT1Q9Y6A1 747 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RGS12O14924 1447 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SALL1Q9NSC2 1324 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 COL4A5P29400 1685 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IGLV3-12A0A075B6K2 115 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 A0A096LNJ9 63 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IGHV3-38A0A0C4DH36 116 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DUXAA6NLW8 204 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MAGEB17A8MXT2 336 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ISM1B1AKI9 464 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IGLL5B9A064 214 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RASA4BC9J798 803 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PRSS46E5RG02 174 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SPECC1L-ADORA2AF8WAN1 911 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 STMND1H3BQB6 276 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DVL2O14641 736 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CLIC2O15247 247 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ITM2AO43736 263 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF73O43830 326 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KIF5CO60282 957 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TRMUO75648 421 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 OFD1O75665 1012 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SOAT2O75908 522 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RHOXF2BP0C7M4 288 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IGHV4-38-2P0DP08 117 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 BRAFP15056 766 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 HNF1AP20823 631 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PTX3P26022 381 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CALCRP30988 508 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PTPN7P35236 360 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GP5P40197 560 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TOB1P50616 345 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GSDMDP57764 484 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KRT17Q04695 432 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF415Q09FC8 603 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBL3Q12788 808 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RAB40BQ12829 278 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ARHGEF7Q14155 803 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DRAP1Q14919 205 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 E2F5Q15329 346 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PUM3Q15397 648 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SAFBQ15424 915 aaKnown RBP eCLIP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 WASHC4Q2M389 1173 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GTDC1Q4AE62 458 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SPECC1Q5M775 1068 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 AGAP7PQ5VUJ5 663 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TYW3Q6IPR3 259 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TAF2Q6P1X5 1199 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TMEM108Q6UXF1 575 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CDHR3Q6ZTQ4 885 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 UNC13DQ70J99 1090 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ANO5Q75V66 913 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 REC114Q7Z4M0 266 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FAM131BQ86XD5 332 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GATAD2AQ86YP4 633 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 HIPK1Q86Z02 1210 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 BATF2Q8N1L9 274 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 OR4K1Q8NGD4 311 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 OR1P1Q8NH06 330 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 STT3BQ8TCJ2 826 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GPR119Q8TDV5 335 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CHCHD10Q8WYQ3 142 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ROBO4Q8WZ75 1007 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MRPS27Q92552 414 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NSMAFQ92636 917 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RSPRY1Q96DX4 576 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 C16orf74Q96GX8 76 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 HIST1H2AHQ96KK5 128 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DGAT2Q96PD7 388 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SIGLEC12Q96PQ1 595 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DMRTA2Q96SC8 542 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CSF3RQ99062 836 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DDOQ99489 341 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PKMYT1Q99640 499 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 HIST1H2AJQ99878 128 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NOL10Q9BSC4 688 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DDX23Q9BUQ8 820 aaKnown RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 P2RY12Q9H244 342 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 XKR8Q9H6D3 395 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NOD2Q9HC29 1040 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KCNH7Q9NS40 1196 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TMEM30AQ9NV96 361 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ETAA1Q9NY74 926 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 UVRAGQ9P2Y5 699 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 THAP10Q9P2Z0 257 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 AKT3Q9Y243 479 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PSAT1Q9Y617 370 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PIAS3Q9Y6X2 628 aa-2.33□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZDBF2Q9HCK1 2354 aa-2.34□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CHD3Q12873 2000 aaKnown RBP-2.34□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms