RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 POU4F1Q01851 419 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 TOP3AQ13472 1001 aaPredicted RBP14.88□□□□□ -0.03
CTNS-202ENST00000381870 SLC10A6Q3KNW5 377 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 SPATS1Q496A3 300 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 SNAP47Q5SQN1 464 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 ATAD3CQ5T2N8 411 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 SULT1C3Q6IMI6 304 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 GATAD2AQ86YP4 633 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 PLD3Q8IV08 490 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 SUN5Q8TC36 379 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 LGALS12Q96DT0 336 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 GAD1Q99259 594 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 FZD8Q9H461 694 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 DDX28Q9NUL7 540 aaKnown RBP14.88□□□□□ -0.03
CTNS-202ENST00000381870 ADPRHL2Q9NX46 363 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 OSGIN1Q9UJX0 560 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 ZNF221Q9UK13 617 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 FBXO10Q9UK96 956 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 UTS2RQ9UKP6 389 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 STAP1Q9ULZ2 295 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 ZNF646O15015 1829 aaPredicted RBP14.87□□□□□ -0.03
CTNS-202ENST00000381870 LOC100130705A0A1B0GUX0 176 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 SSX4O60224 188 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 HPRP00739 348 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 PRKACGP22612 351 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 HTR1EP28566 365 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 MATKP42679 507 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 ACADSBP45954 432 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 EEFSECP57772 596 aaKnown RBP14.87□□□□□ -0.03
CTNS-202ENST00000381870 TNFAIP2Q03169 654 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 SELPLGQ14242 412 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 AMHR2Q16671 573 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 SLC25A52Q3SY17 297 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 PCID2Q5JVF3 399 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 WDR45BQ5MNZ6 344 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 NAPEPLDQ6IQ20 393 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 GDPD3Q7L5L3 318 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 PROSER1Q86XN7 944 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 SLC22A9Q8IVM8 553 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 DTWD1Q8N5C7 304 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 C2CD4AQ8NCU7 369 aaPredicted RBP14.87□□□□□ -0.03
CTNS-202ENST00000381870 BEST2Q8NFU1 509 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 HCAR2Q8TDS4 363 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 FRS2Q8WU20 508 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 EGLN2Q96KS0 407 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 RHNO1Q9BSD3 238 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 MID1IP1Q9NPA3 183 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 OPTCQ9UBM4 332 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 POLG2Q9UHN1 485 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 FBXO5Q9UKT4 447 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 PCDHGA10Q9Y5H3 936 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 CCDC154A6NI56 674 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 USP2O75604 605 aaPredicted RBP14.87□□□□□ -0.03
CTNS-202ENST00000381870 CNTN5O94779 1100 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 CDK14O94921 469 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 SIX3O95343 332 aaPredicted RBP14.87□□□□□ -0.03
CTNS-202ENST00000381870 CRYZL1O95825 349 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 MT-CYBP00156 380 aaPredicted RBP14.87□□□□□ -0.03
CTNS-202ENST00000381870 RAP2AP10114 183 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 ITGB6P18564 788 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 FMO3P31513 532 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 ZFP36L2P47974 494 aaKnown RBP14.87□□□□□ -0.03
CTNS-202ENST00000381870 TKTL1P51854 596 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 CDK5R2Q13319 367 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 MXD4Q14582 209 aaPredicted RBP14.87□□□□□ -0.03
CTNS-202ENST00000381870 TMEM132DQ14C87 1099 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 ACOX1Q15067 660 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 ZNF484Q5JVG2 852 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 METTL4Q8N3J2 472 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 IL17RDQ8NFM7 739 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 OR6F1Q8NGZ6 308 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 ITFG1Q8TB96 612 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 TRAPPC12Q8WVT3 735 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 PROX1Q92786 737 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 FAM49AQ9H0Q0 323 aaPredicted RBP14.87□□□□□ -0.03
CTNS-202ENST00000381870 DPP3Q9NY33 737 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 ANKRD31Q8N7Z5 1873 aa14.87□□□□□ -0.03
CTNS-202ENST00000381870 PABPN1LA6NDY0 278 aaKnown RBP14.86□□□□□ -0.03
CTNS-202ENST00000381870 A8MV72 311 aaPredicted RBP14.86□□□□□ -0.03
CTNS-202ENST00000381870 ICMTO60725 284 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 PTTG1O95997 202 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 RBP1P09455 135 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 LBPP18428 481 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 KRT6CP48668 564 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 MASP1P48740 699 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 SNX16P57768 344 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 KCNK10P57789 538 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 MRPS15P82914 257 aaKnown RBP14.86□□□□□ -0.03
CTNS-202ENST00000381870 PPP2R2BQ00005 443 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 CLCA4Q14CN2 919 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 NPTX1Q15818 432 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 FSCN1Q16658 493 aaKnown RBP14.86□□□□□ -0.03
CTNS-202ENST00000381870 COQ5Q5HYK3 327 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 ZNF691Q5VV52 312 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 AGAP6Q5VW22 663 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 ARHGAP17Q68EM7 881 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 SLC38A6Q8IZM9 456 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 NLGN4XQ8N0W4 816 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 ANKK1Q8NFD2 765 aa14.86□□□□□ -0.03
CTNS-202ENST00000381870 SH3RF2Q8TEC5 729 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms