RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TMEM115Q12893 351 aaPredicted RBP12.53□□□□□ -0.4
SMN1-202ENST00000380707 SF3A2Q15428 464 aaKnown RBP12.53□□□□□ -0.4
SMN1-202ENST00000380707 DBN1Q16643 649 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 HLA-BQ31612 363 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 FAM153CQ494X1 144 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 FASTKD1Q53R41 847 aaKnown RBP12.53□□□□□ -0.4
SMN1-202ENST00000380707 LDLRAP1Q5SW96 308 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 NEPROQ6NW34 567 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 TRMT10BQ6PF06 316 aaKnown RBP12.53□□□□□ -0.4
SMN1-202ENST00000380707 CAPN12Q6ZSI9 719 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 ADGRG6Q86SQ4 1221 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 PARGQ86W56 976 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 GPR161Q8N6U8 529 aaKnown RBP12.53□□□□□ -0.4
SMN1-202ENST00000380707 NAT14Q8WUY8 206 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 OR1E3Q8WZA6 343 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 RUBCNQ92622 972 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 TSACCQ96A04 125 aaPredicted RBP12.53□□□□□ -0.4
SMN1-202ENST00000380707 ULK4Q96C45 1275 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 NUSAP1Q9BXS6 441 aaKnown RBP12.53□□□□□ -0.4
SMN1-202ENST00000380707 TSPYL1Q9H0U9 437 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 TRIM39Q9HCM9 518 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 PARD6AQ9NPB6 346 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 SEMA4GQ9NTN9 838 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 ATXN10Q9UBB4 475 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 PCYT1BQ9Y5K3 369 aaPredicted RBP12.53□□□□□ -0.4
SMN1-202ENST00000380707 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.53□□□□□ -0.4
SMN1-202ENST00000380707 PLXNB3Q9ULL4 1909 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 PCDH15Q96QU1 1955 aa12.53□□□□□ -0.4
SMN1-202ENST00000380707 LNP1A1A4G5 178 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 TNFRSF10CO14798 259 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 ASMTLO95671 621 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 ZNF8P17098 575 aaPredicted RBP12.52□□□□□ -0.4
SMN1-202ENST00000380707 ENGP17813 658 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 KELP23276 732 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 SSTR1P30872 391 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 GPX6P59796 221 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 SRP54P61011 504 aaKnown RBP12.52□□□□□ -0.4
SMN1-202ENST00000380707 VSNL1P62760 191 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 ALG11Q2TAA5 492 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 HSP90AA5PQ58FG0 334 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 UBAP2Q5T6F2 1119 aaKnown RBP12.52□□□□□ -0.4
SMN1-202ENST00000380707 CCNI2Q6ZMN8 369 aaPredicted RBP12.52□□□□□ -0.4
SMN1-202ENST00000380707 C3orf62Q6ZUJ4 267 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 MARK2Q7KZI7 788 aaKnown RBP12.52□□□□□ -0.4
SMN1-202ENST00000380707 KCNMB4Q86W47 210 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 RELL1Q8IUW5 271 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 EIF1ADQ8N9N8 165 aaKnown RBP12.52□□□□□ -0.4
SMN1-202ENST00000380707 OR2I1PQ8NGU4 316 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 GPR150Q8NGU9 434 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 PDXPQ96GD0 296 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 SCARF2Q96GP6 870 aaPredicted RBP12.52□□□□□ -0.4
SMN1-202ENST00000380707 COPS8Q99627 209 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 BOCQ9BWV1 1114 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 TCEAL2Q9H3H9 227 aaPredicted RBP12.52□□□□□ -0.4
SMN1-202ENST00000380707 ERVMER34-1Q9H9K5 563 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 IL21RQ9HBE5 538 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 LRRC4CQ9HCJ2 640 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 CYP4F12Q9HCS2 524 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 DNAJC28Q9NX36 388 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 MOCS1Q9NZB8 636 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 KLQ9UEF7 1012 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 SUFUQ9UMX1 484 aa12.52□□□□□ -0.4
SMN1-202ENST00000380707 ADAMTS9Q9P2N4 1935 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 IGLV3-16A0A075B6K0 115 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 PRSS38A1L453 326 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 SCAMP1O15126 338 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 NUAK1O60285 661 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 OR1I1O60431 355 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 DNAJC6O75061 913 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 LRP3O75074 770 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 CDK14O94921 469 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 CSF2P04141 144 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 SYPP08247 313 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 F7P08709 466 aaPredicted RBP12.52□□□□□ -0.41
SMN1-202ENST00000380707 MSH3P20585 1137 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 AKT1P31749 480 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 HK3P52790 923 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 PPARDQ03181 441 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 CTBP1Q13363 440 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
SMN1-202ENST00000380707 FRG1Q14331 258 aaKnown RBP12.52□□□□□ -0.41
SMN1-202ENST00000380707 CSRP2Q16527 193 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 KYNUQ16719 465 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 ZNF423Q2M1K9 1284 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 ZNF470Q6ECI4 717 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 MRNIPQ6NTE8 343 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 WDR93Q6P2C0 686 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 RD3Q7Z3Z2 195 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 CILP2Q8IUL8 1156 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 HID1Q8IV36 788 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 DENND6AQ8IWF6 608 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 OTUD6BQ8N6M0 293 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 RASGEF1AQ8N9B8 481 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 GSDMBQ8TAX9 411 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMN1-202ENST00000380707 SGF29Q96ES7 293 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 CERS2Q96G23 380 aa12.52□□□□□ -0.41
SMN1-202ENST00000380707 ELF4Q99607 663 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms