RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ECT2LQ008S8 904 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 NAB1Q13506 487 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 WLSQ5T9L3 541 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 CXorf57Q6NSI4 855 aaKnown RBP10.75□□□□□ -0.69
NEDD9-201ENST00000379433 MRNIPQ6NTE8 343 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 PAQR3Q6TCH7 311 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 LYSMD3Q7Z3D4 306 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 C12orf76Q8N812 135 aaPredicted RBP10.75□□□□□ -0.69
NEDD9-201ENST00000379433 KREMEN2Q8NCW0 462 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 PDZD8Q8NEN9 1154 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 CALML6Q8TD86 181 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 IL1RL2Q9HB29 575 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 SEMA4BQ9NPR2 832 aaPredicted RBP10.75□□□□□ -0.69
NEDD9-201ENST00000379433 SAR1AQ9NR31 198 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 CIDEBQ9UHD4 219 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 CD84Q9UIB8 345 aa10.75□□□□□ -0.69
NEDD9-201ENST00000379433 KLHL2O95198 593 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 TRIM16O95361 564 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 TGDSO95455 350 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 ENO3P13929 434 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 CCR2P41597 374 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 PHEXP78562 749 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 DDIASQ8IXT1 998 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 DEFB107AQ8IZN7 70 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 SIDT2Q8NBJ9 832 aaKnown RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 KCNA7Q96RP8 456 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 GPR21Q99679 349 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 CDH19Q9H159 772 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 C1orf232A0A0U1RR37 186 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 H3BNC9 293 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 KLF11O14901 512 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 CACNG3O60359 315 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 EN2P19622 333 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 CASP2P42575 452 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 NUDT2P50583 147 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 RPL14P50914 215 aaKnown RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 DYNC1I2Q13409 638 aaKnown RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 LSM12Q3MHD2 195 aaKnown RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 SLC44A4Q53GD3 710 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 C6orf183Q5T699 404 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 ISLR2Q6UXK2 745 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 DET1Q7L5Y6 550 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 TMEM199Q8N511 208 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 LENG8Q96PV6 779 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 C1QTNF1Q9BXJ1 281 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 KLF16Q9BXK1 252 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 SLCO3A1Q9UIG8 710 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 LSM7Q9UK45 103 aaKnown RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 BTRCQ9Y297 605 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 WASH4PA8MWX3 477 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 ANKRD66B4E2M5 251 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 BTN3A1O00481 513 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 CRCPO75575 148 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 ATP5HO75947 161 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 FGF1P05230 155 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 LTA4HP09960 611 aaKnown RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 LAG3P18627 525 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 HTR7P34969 479 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 IRS1P35568 1242 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 KRT20P35900 424 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 TPD52P55327 224 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 PKNOX1P55347 436 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 ZNF33AQ06730 810 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 SMARCB1Q12824 385 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 ZNF549Q6P9A3 640 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 HERC6Q8IVU3 1022 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 SYTL1Q8IYJ3 562 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 FAM156AQ8NDB6 213 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 PTERQ96BW5 349 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 PTCD3Q96EY7 689 aaKnown RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 COG8Q96MW5 612 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 SLC30A3Q99726 388 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 C17orf80Q9BSJ5 609 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 TMEM106CQ9BVX2 250 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 CIPCQ9C0C6 399 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 SERHL2Q9H4I8 314 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 ZDHHC6Q9H6R6 413 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 FBRSL1Q9HCM7 1045 aaKnown RBP10.74□□□□□ -0.69
NEDD9-201ENST00000379433 NSMCE4AQ9NXX6 385 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 BACE2Q9Y5Z0 518 aa10.74□□□□□ -0.69
NEDD9-201ENST00000379433 MYLKQ15746 1914 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TRAV6A0A075B6T7 132 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 ABHD14A-ACY1A0A1B0GW23 586 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 H3BMM5 538 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CDC7O00311 574 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 KDELR3O43731 214 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 MTX2O75431 263 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CLDN7O95471 211 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 CRTAMO95727 393 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TIMP1P01033 207 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 PLIN5Q00G26 463 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TSNQ15631 228 aaKnown RBP10.73□□□□□ -0.69
NEDD9-201ENST00000379433 INSCQ1MX18 579 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 GRAMD4Q6IC98 578 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 ZYG11AQ6WRX3 759 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 FRMD7Q6ZUT3 714 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 TMEM25Q86YD3 366 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 ELMOD1Q8N336 334 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 GALNT15Q8N3T1 639 aa10.73□□□□□ -0.69
NEDD9-201ENST00000379433 PTGR2Q8N8N7 351 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms