RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TRIM10Q9UDY6 481 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 KCND3Q9UK17 655 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 DNPEPQ9ULA0 475 aa17.54■□□□□ 0.4
PDLIM4-202ENST00000379018 NUAK1O60285 661 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 CREG1O75629 220 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 MTA2O94776 668 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 C9P02748 559 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 CA4P22748 312 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 ZNF165P49910 485 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 MYL5Q02045 173 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 CACHD1Q5VU97 1274 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 CAPRIN2Q6IMN6 1127 aaKnown RBP17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 TEX26Q8N6G2 289 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 AVL9Q8NBF6 648 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 CCHCR1Q8TD31 782 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 RUFY1Q96T51 708 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 CARD9Q9H257 536 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 MYO9AB2RTY4 2548 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 ESPL1Q14674 2120 aa17.53■□□□□ 0.4
PDLIM4-202ENST00000379018 CACNA1DQ01668 2161 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 DDX3XO00571 662 aaKnown RBP eCLIP17.52■□□□□ 0.46e-12■■■■□ 19.8
PDLIM4-202ENST00000379018 SPAG6O75602 509 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 PRLP01236 227 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 HLA-DQB2P05538 268 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 CD48P09326 243 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 GARSP41250 739 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 RPS18P62269 152 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 NIPAL4Q0D2K0 466 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 NADK2Q4G0N4 442 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 ANKRD20A8PQ5CZ79 823 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 ZNF569Q5MCW4 686 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 CCDC122Q5T0U0 273 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 FAM182AQ5T1J6 154 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 CPZQ66K79 652 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 E4F1Q66K89 784 aaPredicted RBP17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 TTC30BQ8N4P2 665 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 ACTL8Q9H568 366 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 ZNF768Q9H5H4 540 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 MRPL47Q9HD33 250 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 DTLQ9NZJ0 730 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 MAP10Q9P2G4 905 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 PADI1Q9ULC6 663 aa17.52■□□□□ 0.4
PDLIM4-202ENST00000379018 MTX2O75431 263 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 SLC25A14O95258 325 aaPredicted RBP17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 TIAF1O95411 115 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 SKILP12757 684 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 RPL10P27635 214 aaKnown RBP17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 ANP32AP39687 249 aaKnown RBP17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 SLC19A1P41440 591 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 KLHL30Q0D2K2 578 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 GALNT3Q14435 633 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 QPCTQ16769 361 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 PPP1R3BQ86XI6 285 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 SSC4DQ8WTU2 575 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 TRIM11Q96F44 468 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 LHX9Q9NQ69 397 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 CHMP5Q9NZZ3 219 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 LUZP4Q9P127 313 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 ZNF624Q9P2J8 865 aaPredicted RBP17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 SLC23A2Q9UGH3 650 aa17.51■□□□□ 0.39
PDLIM4-202ENST00000379018 OR52A4PA6NMU1 304 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 SEMA7AO75326 666 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 PIRTP0C851 137 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 RNF224P0DH78 156 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 GZMAP12544 262 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 XRCC1P18887 633 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 CD86P42081 329 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 CAPZBP47756 277 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 PGDP52209 483 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 DRG2P55039 364 aaKnown RBP17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 PPP1CAP62136 330 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 SLC25A11Q02978 314 aaKnown RBP17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 IL11RAQ14626 422 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 KCNAB1Q14722 419 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 TIGD7Q6NT04 549 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 SASS6Q6UVJ0 657 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 APTXQ7Z2E3 356 aaKnown RBP17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 AOPEPQ8N6M6 819 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 GALNT11Q8NCW6 608 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 ARRDC2Q8TBH0 407 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 CXorf40BQ96DE9 158 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 SLC25A23Q9BV35 468 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 MLPHQ9BV36 600 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 SHOC2Q9UQ13 582 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 CREBBPQ92793 2442 aa17.5■□□□□ 0.39
PDLIM4-202ENST00000379018 ARGFXA6NJG6 315 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 MATN3O15232 486 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 MYBL1P10243 752 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 ZNF7P17097 686 aaPredicted RBP17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 IL4RP24394 825 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 CCL11P51671 97 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 GALNT2Q10471 571 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 TUBB3Q13509 450 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 SEMA5AQ13591 1074 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 GPR18Q14330 331 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 PIGHQ14442 188 aaPredicted RBP17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 NCBP2-AS2Q69YL0 99 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 FAM199XQ6PEV8 388 aaPredicted RBP17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 PRSS42Q7Z5A4 293 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 ADGRG6Q86SQ4 1221 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms