RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 GKP32189 559 aa14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 CHI3L1P36222 383 aaPredicted RBP14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 ROR2Q01974 943 aaKnown RBP14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 CLCQ05315 142 aa14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 PLEKHG6Q3KR16 790 aa14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 LACTB2Q53H82 288 aaPredicted RBP14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 PRMT9Q6P2P2 845 aa14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 HORMAD1Q86X24 394 aa14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 RIN3Q8TB24 985 aa14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 IMP4Q96G21 291 aaKnown RBP14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 FCRL3Q96P31 734 aaPredicted RBP14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 CIDEBQ9UHD4 219 aa14.08□□□□□ -0.15
SHROOM1-203ENST00000378679 SMNDC1O75940 238 aaKnown RBP eCLIP14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 CDH2P19022 906 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 NRIP1P48552 1158 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 ADAM17P78536 824 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 KHDC1Q4VXA5 237 aaKnown RBP14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 RBM15BQ8NDT2 890 aaKnown RBP14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 IL12RB2Q99665 862 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 EBF4Q9BQW3 602 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 GRIP2Q9C0E4 1043 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 IPPKQ9H8X2 491 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 CAPN10Q9HC96 672 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 PADI4Q9UM07 663 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 AK5Q9Y6K8 562 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 ANKDD1BA6NHY2 528 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 ADAM12O43184 909 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 CLDN7O95471 211 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 CLPTM1O96005 669 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 ALBP02768 609 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 RHOP08100 348 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 SLC35G4P0C7Q5 338 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 HNF4AP41235 474 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 NSG1P42857 185 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 MAPKAPK3Q16644 382 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 TIGD2Q4W5G0 525 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 IRGCQ6NXR0 463 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 C12orf76Q8N812 135 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 ZNF784Q8NCA9 323 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 GFM2Q969S9 779 aaKnown RBP14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 C19orf60Q96EN9 201 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 LENG8Q96PV6 779 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 NOL11Q9H8H0 719 aaKnown RBP14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 GPSM3Q9Y4H4 160 aa14.08□□□□□ -0.16
SHROOM1-203ENST00000378679 C15orf38-AP3S2A0A0A6YYH1 394 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 HNRNPRO43390 633 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 TIMP1P01033 207 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 CNTN1Q12860 1018 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 LCP2Q13094 533 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 BLMHQ13867 455 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 ARSIQ5FYB1 569 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 ARPINQ7Z6K5 226 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 ZNF555Q8NEP9 628 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 REPS1Q96D71 796 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 RTP4Q96DX8 246 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 MRGPRX2Q96LB1 330 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 FEM1AQ9BSK4 669 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 POLR2AP24928 1970 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 TCRBV5S1A1TA0A578 114 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 GSC2O15499 205 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 RFPL1O75677 317 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 SIX3O95343 332 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 NTRK1P04629 796 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 ATP6V1B2P21281 511 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 DSC1Q08554 894 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 PIM3Q86V86 326 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 GSTCDQ8NEC7 633 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 GPR156Q8NFN8 814 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 OR6Y1Q8NGX8 325 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 ZNF483Q8TF39 744 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 CLP1Q92989 425 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 SNX8Q9Y5X2 465 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 WASF2Q9Y6W5 498 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 SBF2Q86WG5 1849 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 TYROBPO43914 113 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 ATG13O75143 517 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 SLC44A4Q53GD3 710 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 GDPD4Q6W3E5 623 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 ZNF598Q86UK7 904 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 ULK2Q8IYT8 1036 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 TXLNGYQ9BZA5 131 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 EIF2B4Q9UI10 523 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 USP3Q9Y6I4 520 aa14.07□□□□□ -0.16
SHROOM1-203ENST00000378679 SAC3D1A6NKF1 404 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 TGM5O43548 720 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 ITM2AO43736 263 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 FSHRP23945 695 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 NAE1Q13564 534 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 SNX20Q7Z614 316 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 TMEM135Q86UB9 458 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 FLCNQ8NFG4 579 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 OR14C36Q8NHC7 312 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 BPIFB1Q8TDL5 484 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 TWIST2Q8WVJ9 160 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 TOX2Q96NM4 488 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 NPAS2Q99743 824 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 MOCS1Q9NZB8 636 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 LIMD1Q9UGP4 676 aa14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 PAIP2BQ9ULR5 123 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-203ENST00000378679 MTX2O75431 263 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms