RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 HBEGFQ99075 208 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 COLEC11Q9BWP8 271 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 TP63Q9H3D4 680 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 NXF3Q9H4D5 531 aaKnown RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 TREX1Q9NSU2 369 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 CENPFP49454 3210 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 CCDC162PA2VCL2 907 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 CST1P01037 141 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 IGFBP6P24592 240 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 IL5RAQ01344 420 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 GALNT1Q10472 559 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 AAK1Q2M2I8 961 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 GPRIN1Q7Z2K8 1008 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 PTRH1Q86Y79 214 aaKnown RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 RPL3LQ92901 407 aaKnown RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 EFHD2Q96C19 240 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 MARCH4Q9P2E8 410 aaPredicted RBP15.76■□□□□ 0.11
CKAP4-201ENST00000378026 CACNG4Q9UBN1 327 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 GPR45Q9Y5Y3 372 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 CSADQ9Y600 493 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 NRCAMQ92823 1304 aa15.76■□□□□ 0.11
CKAP4-201ENST00000378026 PHIPQ8WWQ0 1821 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 SLC1A7O00341 560 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 SNPHO15079 494 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 TBX1O43435 398 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 ANXA9O76027 345 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 KRT75O95678 551 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 CYBBP04839 570 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 ZNF286BP0CG31 522 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 FMO3P31513 532 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 MAXP61244 160 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 IFITM2Q01629 132 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 FAM187BQ17R55 369 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 SULT1C3Q6IMI6 304 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 ENPP6Q6UWR7 440 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 CLEC20AQ6ZU45 233 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 ARMC8Q8IUR7 673 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 POC5Q8NA72 575 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 TSPAN17Q96FV3 270 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 OTUD5Q96G74 571 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 MBOAT4Q96T53 435 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 SMOC2Q9H3U7 446 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 CARS2Q9HA77 564 aaKnown RBP15.75■□□□□ 0.11
CKAP4-201ENST00000378026 SLC52A3Q9NQ40 469 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 KCTD3Q9Y597 815 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 HLA-DQB2P05538 268 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 CDH1P12830 882 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 RPL34P49207 117 aaKnown RBP15.75■□□□□ 0.11
CKAP4-201ENST00000378026 OR4D1Q15615 310 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 KIAA0930Q6ICG6 404 aaPredicted RBP15.75■□□□□ 0.11
CKAP4-201ENST00000378026 LAIR2Q6ISS4 152 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 TXNDC11Q6PKC3 985 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 RAB44Q7Z6P3 723 aaPredicted RBP15.75■□□□□ 0.11
CKAP4-201ENST00000378026 RIMKLAQ8IXN7 391 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 OR10Q1Q8NGQ4 319 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 RORBQ92753 470 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 RMND5AQ9H871 391 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 RGS18Q9NS28 235 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 ERVK-18Q9QC07 812 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 SUN2Q9UH99 717 aa15.75■□□□□ 0.11
CKAP4-201ENST00000378026 LCTP09848 1927 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 SNX2O60749 519 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 SLC22A3O75751 556 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 MYL3P08590 195 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 CYP4B1P13584 511 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 EDNRBP24530 442 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 CA8P35219 290 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 CLCN5P51795 746 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 POLR2JP52435 117 aaKnown RBP15.74■□□□□ 0.11
CKAP4-201ENST00000378026 CCNA1P78396 465 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 PTPRCAPQ14761 206 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 FAM98BQ52LJ0 330 aaKnown RBP15.74■□□□□ 0.11
CKAP4-201ENST00000378026 SMYD5Q6GMV2 418 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 GALNT5Q7Z7M9 940 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 L3HYPDHQ96EM0 354 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 RHNO1Q9BSD3 238 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 NDFIP2Q9NV92 336 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 NUDT5Q9UKK9 219 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 PSMD3O43242 534 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 MATN4O95460 622 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 CHEK2O96017 543 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 IL12AP29459 219 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 ARSDP51689 593 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 COPZ1P61923 177 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 CBX2Q14781 532 aaPredicted RBP15.74■□□□□ 0.11
CKAP4-201ENST00000378026 LAPTM4AQ15012 233 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 PAQR9Q6ZVX9 377 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 OR6Q1Q8NGQ2 317 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 MCOLN3Q8TDD5 553 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 ELMO1Q92556 727 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 MRGPRX2Q96LB1 330 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 CGREF1Q99674 301 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 FEM1AQ9BSK4 669 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 FAM49AQ9H0Q0 323 aaPredicted RBP15.74■□□□□ 0.11
CKAP4-201ENST00000378026 WDR70Q9NW82 654 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 ERAP1Q9NZ08 941 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 LIMD1Q9UGP4 676 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 LEF1Q9UJU2 399 aaPredicted RBP15.74■□□□□ 0.11
CKAP4-201ENST00000378026 SUPT3HB4E1H0 165 aa15.74■□□□□ 0.11
CKAP4-201ENST00000378026 RECQL4O94761 1208 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms