RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 LRTM1Q9HBL6 345 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 MIEF1Q9NQG6 463 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 PDP1Q9P0J1 537 aaPredicted RBP8.71□□□□□ -1.01
PCDH9-202ENST00000377865 IGSF6O95976 241 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 UGT2B4P06133 528 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 PRKAR1AP10644 381 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 PKMP14618 531 aaKnown RBP8.71□□□□□ -1.01
PCDH9-202ENST00000377865 MAGEA6P43360 314 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 IDH2P48735 452 aaKnown RBP8.71□□□□□ -1.01
PCDH9-202ENST00000377865 EN1Q05925 392 aaPredicted RBP8.71□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF252P-AS1Q0IIN9 211 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 GALNT3Q14435 633 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 AP5B1Q2VPB7 878 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 PLEKHG6Q3KR16 790 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 PLEKHG4Q58EX7 1191 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 RAP1GAP2Q684P5 730 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 PLEKHM3Q6ZWE6 761 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 ZFP28Q8NHY6 868 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 ATL1Q8WXF7 558 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 TMCO6Q96DC7 493 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 TMEM209Q96SK2 561 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 COL18A1P39060 1754 aa8.71□□□□□ -1.01
PCDH9-202ENST00000377865 CNTNAP1P78357 1384 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 SMIM28A0A1B0GU29 152 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 HOXA2O43364 376 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 ZBTB14O43829 449 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 AIREO43918 545 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 CYP4B1P13584 511 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 GM2AP17900 193 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 MC4RP32245 332 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 ALDH6A1Q02252 535 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 SOWAHAQ2M3V2 549 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 ZCCHC8Q6NZY4 707 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 WDTC1Q8N5D0 677 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 RTL3Q8N8U3 475 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 HASPINQ8TF76 798 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 FAR1Q8WVX9 515 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 TWNKQ96RR1 684 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 AKTIPQ9H8T0 292 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 AASDHPPTQ9NRN7 309 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 CCM2LQ9NUG4 571 aaPredicted RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 ING3Q9NXR8 418 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 RPLP0P05388 317 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 MBL2P11226 248 aaPredicted RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 PORP16435 677 aaPredicted RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 MYF6P23409 242 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 TUBA1BP68363 451 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 SPIBQ01892 262 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 DGKKQ5KSL6 1271 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 MAP1SQ66K74 1059 aaPredicted RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 TUBA1AQ71U36 451 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 ZBTB46Q86UZ6 589 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 CRYBG2Q8N1P7 616 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 HDAC2Q92769 488 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 MTFMTQ96DP5 389 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 ZFP14Q9HCL3 533 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 SNX7Q9UNH6 387 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 HES2Q9Y543 173 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 CYP11A1P05108 521 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 ATXN1P54253 815 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 VGLL4Q14135 290 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF284Q2VY69 593 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 EML3Q32P44 896 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 PAN2Q504Q3 1202 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 PYDC2Q56P42 97 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 PITRM1Q5JRX3 1037 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 DPY19L2P1Q6NXN4 242 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 CNSTQ6PJW8 725 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 RBFAQ8N0V3 343 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 TRUB1Q8WWH5 349 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 VPS35Q96QK1 796 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 POPDC3Q9HBV1 291 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 RPRD1BQ9NQG5 326 aaKnown RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 RAD18Q9NS91 495 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 PNMA8BQ9ULN7 279 aaPredicted RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 PRG3Q9Y2Y8 225 aaPredicted RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 MFHAS1Q9Y4C4 1052 aa8.71□□□□□ -1.02
PCDH9-202ENST00000377865 ARIH1Q9Y4X5 557 aaPredicted RBP8.71□□□□□ -1.02
PCDH9-202ENST00000377865 LSM1O15116 133 aaKnown RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 TYMPP19971 482 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 ENTPD1P49961 510 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 GABARAPL2P60520 117 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 MAXP61244 160 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 BCL2L1Q07817 233 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 CAMK2GQ13555 558 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 RAB39AQ14964 217 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 FGD3Q5JSP0 725 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 TMEM214Q6NUQ4 689 aaKnown RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 CDC73Q6P1J9 531 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 TLK2Q86UE8 772 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 C2CD4AQ8NCU7 369 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-202ENST00000377865 SPATA22Q8NHS9 363 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 CLEC4CQ8WTT0 213 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 HAPLN3Q96S86 360 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 MTRRQ9UBK8 725 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 H3BN98 237 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 M0QX08 132 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 C22orf31O95567 290 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 NDST3O95803 873 aa8.7□□□□□ -1.02
PCDH9-202ENST00000377865 GOT2P00505 430 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms