RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499		E5RI56	91 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	TBX10	O75333	385 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	UNC5C	O95185	931 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	CR2	P20023	1033 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	CHRM3	P20309	590 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	GABRB3	P28472	473 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	MAPK8	P45983	427 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	KYAT3	Q6YP21	454 aa	Known RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ZNF557	Q8N988	423 aa	Predicted RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	FAM161B	Q96MY7	647 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	RILP	Q96NA2	401 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	OMD	Q99983	421 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	TRIM55	Q9BYV6	548 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	EHD1	Q9H4M9	534 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	SIAE	Q9HAT2	523 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	PRKAG3	Q9UGI9	489 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ZMYM5	Q9UJ78	669 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ARL2BP	Q9Y2Y0	163 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	COQ6	Q9Y2Z9	468 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	CHD9	Q3L8U1	2897 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ALPK3	Q96L96	1907 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	MATN2	O00339	956 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	KPNA3	O00505	521 aa	Predicted RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	NFATC1	O95644	943 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	OCM2	P0CE71	109 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	OCM	P0CE72	109 aa	Predicted RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	NR4A1	P22736	598 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	STT3A	P46977	705 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	MYLK3	Q32MK0	819 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	TIFAB	Q6ZNK6	161 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	METTL3	Q86U44	580 aa	Known RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	CRLF3	Q8IUI8	442 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	CILP2	Q8IUL8	1156 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	PIP4K2C	Q8TBX8	421 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	STARD8	Q92502	1023 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	MCUR1	Q96AQ8	359 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	TSPAN17	Q96FV3	270 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	KLHL32	Q96NJ5	620 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	LRRC3B	Q96PB8	259 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	SHCBP1L	Q9BZQ2	653 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	MRPL46	Q9H2W6	279 aa	Known RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	VWA7	Q9Y334	891 aa		11.61	□□□□□ -0.55
LMO7-204	ENST00000377499	ZSCAN5B	A6NJL1	495 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	TTC34	A8MYJ7	566 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	RNASEH1	O60930	286 aa	Known RBP	11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	CLDN7	O95471	211 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	PRL	P01236	227 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	MYL2	P10916	166 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	ITGB6	P18564	788 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	HADHA	P40939	763 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	ARHGEF7	Q14155	803 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	SKIV2L	Q15477	1246 aa	Known RBP	11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	CARD16	Q5EG05	197 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	TTC7B	Q86TV6	843 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	C10orf107	Q8IVU9	208 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	FAM217A	Q8IXS0	508 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	AHI1	Q8N157	1196 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	DEPDC4	Q8N2C3	294 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	CHST14	Q8NCH0	376 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	VN1R2	Q8NFZ6	395 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	NCSTN	Q92542	709 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	PBXIP1	Q96AQ6	731 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	NXNL1	Q96CM4	212 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	RANBP9	Q96S59	729 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	GPR22	Q99680	433 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	KXD1	Q9BQD3	176 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	GRIP2	Q9C0E4	1043 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	MYLK2	Q9H1R3	596 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	MFSD1	Q9H3U5	465 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	NEMP1	O14524	444 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	TULP3	O75386	442 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	PGLS	O95336	258 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	PAPSS2	O95340	614 aa	Predicted RBP	11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	CYP17A1	P05093	508 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	SLC18A1	P54219	525 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	BST1	Q10588	318 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	HECTD2	Q5U5R9	776 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	AFTPH	Q6ULP2	937 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	OTOA	Q7RTW8	1153 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	OTUB2	Q96DC9	234 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	MRPL38	Q96DV4	380 aa	Known RBP	11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	CCDC134	Q9H6E4	229 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	CYP4F12	Q9HCS2	524 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	DZANK1	Q9NVP4	752 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	ZMAT5	Q9UDW3	170 aa	Known RBP	11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	CRLS1	Q9UJA2	301 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	FIS1	Q9Y3D6	152 aa		11.6	□□□□□ -0.55
LMO7-204	ENST00000377499	TK2	O00142	265 aa		11.59	□□□□□ -0.55
LMO7-204	ENST00000377499	GPR39	O43194	453 aa		11.59	□□□□□ -0.55
LMO7-204	ENST00000377499	PLIN3	O60664	434 aa		11.59	□□□□□ -0.55
LMO7-204	ENST00000377499	DCTN3	O75935	186 aa		11.59	□□□□□ -0.55
LMO7-204	ENST00000377499	POP4	O95707	220 aa	Known RBP	11.59	□□□□□ -0.55
LMO7-204	ENST00000377499	HSPA4L	O95757	839 aa		11.59	□□□□□ -0.55
LMO7-204	ENST00000377499	CHEK2	O96017	543 aa		11.59	□□□□□ -0.55
LMO7-204	ENST00000377499	CRABP2	P29373	138 aa		11.59	□□□□□ -0.55
LMO7-204	ENST00000377499	CDKN1C	P49918	316 aa	Predicted RBP	11.59	□□□□□ -0.55
LMO7-204	ENST00000377499	PTPRN	Q16849	979 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms