RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 TAB3Q8N5C8 712 aaPredicted RBP14.09□□□□□ -0.15
CLCN6-203ENST00000376490 GDAP1Q8TB36 358 aa14.09□□□□□ -0.15
CLCN6-203ENST00000376490 FGF11Q92914 225 aa14.09□□□□□ -0.15
CLCN6-203ENST00000376490 PRR11Q96HE9 360 aaPredicted RBP14.09□□□□□ -0.15
CLCN6-203ENST00000376490 VPS35Q96QK1 796 aa14.09□□□□□ -0.15
CLCN6-203ENST00000376490 RDH14Q9HBH5 336 aa14.09□□□□□ -0.15
CLCN6-203ENST00000376490 KLC4Q9NSK0 619 aa14.09□□□□□ -0.15
CLCN6-203ENST00000376490 PKP3Q9Y446 797 aa14.09□□□□□ -0.15
CLCN6-203ENST00000376490 ARL5AQ9Y689 179 aa14.09□□□□□ -0.15
CLCN6-203ENST00000376490 DSPP15924 2871 aaKnown RBP14.09□□□□□ -0.15
CLCN6-203ENST00000376490 GLYATL1P3A0A0U1RQE8 302 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 GAPDHSO14556 408 aaPredicted RBP14.08□□□□□ -0.16
CLCN6-203ENST00000376490 GPR39O43194 453 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 VEGFDO43915 354 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 LPOP22079 712 aaPredicted RBP14.08□□□□□ -0.16
CLCN6-203ENST00000376490 EIF2S3P41091 472 aaKnown RBP14.08□□□□□ -0.16
CLCN6-203ENST00000376490 INHBCP55103 352 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 NR1D2Q14995 579 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 TAF1AQ15573 450 aaPredicted RBP14.08□□□□□ -0.16
CLCN6-203ENST00000376490 TBC1D25Q3MII6 688 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 PLA2G4EQ3MJ16 856 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 ZDHHC20Q5W0Z9 365 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 IYDQ6PHW0 289 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 ZNF761Q86XN6 746 aaPredicted RBP14.08□□□□□ -0.16
CLCN6-203ENST00000376490 SLC13A5Q86YT5 568 aaPredicted RBP14.08□□□□□ -0.16
CLCN6-203ENST00000376490 ZNF547Q8IVP9 402 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 KLHDC8BQ8IXV7 354 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 LSMEM2Q8N112 164 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 SFRP1Q8N474 314 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 OR4K2Q8NGD2 314 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 WDR36Q8NI36 951 aaKnown RBP14.08□□□□□ -0.16
CLCN6-203ENST00000376490 DTX3LQ8TDB6 740 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 SLC37A2Q8TED4 501 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 UBE2Q2Q8WVN8 375 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 C1orf54Q8WWF1 131 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 SLC46A1Q96NT5 459 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 TBL1YQ9BQ87 522 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 GRPEL1Q9HAV7 217 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 ARNT2Q9HBZ2 717 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 EPB41L5Q9HCM4 733 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 ASCL3Q9NQ33 180 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 PRDM8Q9NQV8 689 aa14.08□□□□□ -0.16
CLCN6-203ENST00000376490 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLCN6-203ENST00000376490 RALYQ9UKM9 306 aaKnown RBP14.08□□□□□ -0.16
CLCN6-203ENST00000376490 A0A087WV48 116 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 CCDC187A0A096LP49 1063 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 C2orf81A6NN90 581 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 GPR89AB7ZAQ6 455 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 KMOO15229 486 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 LIASO43766 372 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 PPFIA2O75334 1257 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 ZNF189O75820 626 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-203ENST00000376490 DXOO77932 396 aaKnown RBP14.07□□□□□ -0.16
CLCN6-203ENST00000376490 GPR89BP0CG08 455 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 ZNF7P17097 686 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-203ENST00000376490 TPH1P17752 444 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 ITPKBP27987 946 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 CD1CP29017 333 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 GPR3P46089 330 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 ZFP36L1Q07352 338 aaKnown RBP14.07□□□□□ -0.16
CLCN6-203ENST00000376490 SNX1Q13596 522 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 COL28A1Q2UY09 1125 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 NKAIN2Q5VXU1 208 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 KCTD11Q693B1 232 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 ZNF574Q6ZN55 896 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-203ENST00000376490 RAB11FIP2Q7L804 512 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 PIM3Q86V86 326 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 LRRTM4Q86VH4 590 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 ZNF398Q8TD17 642 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 BRSK1Q8TDC3 778 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 LIN37Q96GY3 246 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-203ENST00000376490 ZNF578Q96N58 590 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-203ENST00000376490 TMEM74Q96NL1 305 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 PPP1R2P1Q96PQ5 205 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 SEMA6CQ9H3T2 930 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 OSGEPL1Q9H4B0 414 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 PPP2R2CQ9Y2T4 447 aa14.07□□□□□ -0.16
CLCN6-203ENST00000376490 IGHV1OR21-1A0A087WYE8 117 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 A6NCN8 305 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 TMX2-CTNND1H3BSU7 103 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 TNFSF15O95150 251 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 CRTAMO95727 393 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 CPNE6O95741 557 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 F3P13726 295 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 HGFP14210 728 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 HOXB3P14651 431 aaPredicted RBP14.06□□□□□ -0.16
CLCN6-203ENST00000376490 RBMS1P29558 406 aaKnown RBP14.06□□□□□ -0.16
CLCN6-203ENST00000376490 STIP1P31948 543 aaKnown RBP14.06□□□□□ -0.16
CLCN6-203ENST00000376490 CCKBRP32239 447 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 FASLGP48023 281 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 CLCNKAP51800 687 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 TMPRSS15P98073 1019 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 CFHR1Q03591 330 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 CCDC173Q0VFZ6 552 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 ITGA9Q13797 1035 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 OASLQ15646 514 aaKnown RBP14.06□□□□□ -0.16
CLCN6-203ENST00000376490 INSCQ1MX18 579 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.06□□□□□ -0.16
CLCN6-203ENST00000376490 PRUNE1Q86TP1 453 aa14.06□□□□□ -0.16
CLCN6-203ENST00000376490 FBXO39Q8N4B4 442 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms