RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 MMP2P08253 660 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 FGF3P11487 239 aaPredicted RBP12.08□□□□□ -0.48
LSM2-208ENST00000375661 MYCLP1P12525 358 aaPredicted RBP12.08□□□□□ -0.48
LSM2-208ENST00000375661 GP1BBP13224 206 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 CCL4P13236 92 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 CASQ1P31415 396 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 CASRP41180 1078 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 GDF10P55107 478 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 OR1D5P58170 312 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 FOXK1P85037 733 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 ILF3Q12906 894 aaKnown RBP eCLIP12.08□□□□□ -0.482e-7■■□□□ 14.4
LSM2-208ENST00000375661 SNX1Q13596 522 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 RALGPS1Q5JS13 557 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 PNCKQ6P2M8 343 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 DRICH1Q6PGQ1 229 aaPredicted RBP12.08□□□□□ -0.48
LSM2-208ENST00000375661 CLEC18BQ6UXF7 455 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 ZSWIM9Q86XI8 627 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 CREG2Q8IUH2 290 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 SFTPA2Q8IWL1 248 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.08□□□□□ -0.48
LSM2-208ENST00000375661 CLEC18CQ8NCF0 446 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 AGBL5Q8NDL9 886 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 OR4D9Q8NGE8 314 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 CCL4L1Q8NHW4 92 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 ZDHHC1Q8WTX9 485 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 SPOCK2Q92563 424 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 CCDC74BQ96LY2 380 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 VAT1Q99536 393 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 TMEM121Q9BTD3 319 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 EFHD1Q9BUP0 239 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 AP1M1Q9BXS5 423 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 ASPSCR1Q9BZE9 553 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 EPN3Q9H201 632 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 GLOD4Q9HC38 313 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 TRNAU1APQ9NX07 287 aaKnown RBP12.08□□□□□ -0.48
LSM2-208ENST00000375661 PCDHGC4Q9Y5F7 938 aa12.08□□□□□ -0.48
LSM2-208ENST00000375661 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.07□□□□□ -0.48
LSM2-208ENST00000375661 A0A1W2PQ67 120 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 C5orf60A6NFR6 353 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 B4E171 279 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 AGRPO00253 132 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 HTRA2O43464 458 aaPredicted RBP12.07□□□□□ -0.48
LSM2-208ENST00000375661 FZD6O60353 706 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 FGF1P05230 155 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 LIFP15018 202 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 NFKB1P19838 968 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 CES1P23141 567 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 CD1CP29017 333 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 ALDH4A1P30038 563 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 UGT1A3P35503 534 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 TSPAN7P41732 249 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 KCNJ1P48048 391 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 ARSDP51689 593 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 MAZP56270 477 aaKnown RBP12.07□□□□□ -0.48
LSM2-208ENST00000375661 RAB15P59190 212 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 BCL2L1Q07817 233 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 TRAF2Q12933 501 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 CYP1B1Q16678 543 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 AMZ1Q400G9 498 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 ANKRD20A2Q5SQ80 823 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 ANKRD20A1Q5TYW2 823 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 ANKRD20A3Q5VUR7 823 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 PID1Q7Z2X4 250 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 CACNA2D3Q8IZS8 1091 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 FAM71DQ8N9W8 422 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 CCDC110Q8TBZ0 833 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 TADA1Q96BN2 335 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 RTP4Q96DX8 246 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 IMP4Q96G21 291 aaKnown RBP12.07□□□□□ -0.48
LSM2-208ENST00000375661 SLC45A3Q96JT2 553 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 CAPZA3Q96KX2 299 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 TEFMQ96QE5 360 aaKnown RBP12.07□□□□□ -0.48
LSM2-208ENST00000375661 NUDT22Q9BRQ3 303 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 LGR4Q9BXB1 951 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 TEX101Q9BY14 249 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 SLC25A51Q9H1U9 297 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 PHPT1Q9NRX4 125 aaPredicted RBP12.07□□□□□ -0.48
LSM2-208ENST00000375661 SPATS2LQ9NUQ6 558 aaKnown RBP12.07□□□□□ -0.48
LSM2-208ENST00000375661 TAAR2Q9P1P5 351 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 KLHL8Q9P2G9 620 aaPredicted RBP12.07□□□□□ -0.48
LSM2-208ENST00000375661 MOSPD1Q9UJG1 213 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 TRHDEQ9UKU6 1024 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 DRG1Q9Y295 367 aaKnown RBP12.07□□□□□ -0.48
LSM2-208ENST00000375661 TTLL3Q9Y4R7 772 aa12.07□□□□□ -0.48
LSM2-208ENST00000375661 ECEL1O95672 775 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 PRKCGP05129 697 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 THRAP10827 490 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 GM2AP17900 193 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 NFKBIAP25963 317 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 TEAD1P28347 426 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 STIP1P31948 543 aaKnown RBP12.06□□□□□ -0.48
LSM2-208ENST00000375661 CSTF2P33240 577 aaKnown RBP eCLIP12.06□□□□□ -0.48
LSM2-208ENST00000375661 CD86P42081 329 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 BIRC2Q13490 618 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 DCAF12Q5T6F0 453 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 TTC27Q6P3X3 843 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 PRUNE1Q86TP1 453 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 PTRH1Q86Y79 214 aaKnown RBP12.06□□□□□ -0.48
LSM2-208ENST00000375661 NRROSQ86YC3 692 aa12.06□□□□□ -0.48
LSM2-208ENST00000375661 GLIS1Q8NBF1 620 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms