RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SEMA4BQ9NPR2 832 aaPredicted RBP20.99■□□□□ 0.95
UPF3A-202ENST00000375299 TIMM22Q9Y584 194 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 C16orf96A6NNT2 1141 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 TULP3O75386 442 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 PEX11BO96011 259 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 SMIM10L2AP0DMW4 78 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 SMIM10L2BP0DMW5 78 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 IL7RP16871 459 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 HOXB8P17481 243 aaPredicted RBP20.99■□□□□ 0.95
UPF3A-202ENST00000375299 IDUAP35475 653 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 ZNF846Q147U1 533 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 TIGD2Q4W5G0 525 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 HDAC2Q92769 488 aaKnown RBP20.99■□□□□ 0.95
UPF3A-202ENST00000375299 LRRC3Q9BY71 257 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 MPP6Q9NZW5 540 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 DAPK2Q9UIK4 370 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 TRIM17Q9Y577 477 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 KCTD3Q9Y597 815 aa20.99■□□□□ 0.95
UPF3A-202ENST00000375299 TCF3P15923 654 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 CCR1P32246 355 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 AQP6Q13520 282 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 SPCS2Q15005 226 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 OXA1LQ15070 435 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 LDLRAP1Q5SW96 308 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 SGCDQ92629 289 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 FKBP10Q96AY3 582 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 ITGB1BP2Q9UKP3 347 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 PCDHB3Q9Y5E6 796 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 CPQQ9Y646 472 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 ANKRD36A6QL64 1941 aa20.98■□□□□ 0.95
UPF3A-202ENST00000375299 KRBA1A5PL33 1030 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 SUPT3HB4E1H0 165 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 CLDN25C9JDP6 229 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 HPRP00739 348 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 MMP2P08253 660 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 ILF2Q12905 390 aaKnown RBP20.97■□□□□ 0.95
UPF3A-202ENST00000375299 STK32CQ86UX6 486 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 SCML4Q8N228 414 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 FBXO39Q8N4B4 442 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 ISG20Q96AZ6 181 aaKnown RBP20.97■□□□□ 0.95
UPF3A-202ENST00000375299 SH3YL1Q96HL8 342 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-202ENST00000375299 TBATAQ96M53 351 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 ALPK1Q96QP1 1244 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 TRIM62Q9BVG3 475 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 FUNDC2Q9BWH2 189 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 NUSAP1Q9BXS6 441 aaKnown RBP20.97■□□□□ 0.95
UPF3A-202ENST00000375299 MROQ9BYG7 248 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 ATAD3AQ9NVI7 634 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 RNF181Q9P0P0 153 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 WARS2Q9UGM6 360 aaKnown RBP20.97■□□□□ 0.95
UPF3A-202ENST00000375299 SUN2Q9UH99 717 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 E9PAM4 449 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 PDHXO00330 501 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 KERAO60938 352 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 DSC2Q02487 901 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 POLD3Q15054 466 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-202ENST00000375299 XKR7Q5GH72 579 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 C1QTNF12Q5T7M4 302 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 ANKS6Q68DC2 871 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 TFAP2DQ7Z6R9 452 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 DPP9Q86TI2 863 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 PARP8Q8N3A8 854 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 MAGEE1Q9HCI5 957 aa20.97■□□□□ 0.95
UPF3A-202ENST00000375299 MSI1O43347 362 aaKnown RBP20.96■□□□□ 0.95
UPF3A-202ENST00000375299 LDB2O43679 373 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 BCAS1O75363 584 aaPredicted RBP20.96■□□□□ 0.95
UPF3A-202ENST00000375299 GLP2RO95838 553 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 NPPAP01160 153 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 RAP2AP10114 183 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 EIF2B2P49770 351 aaKnown RBP20.96■□□□□ 0.95
UPF3A-202ENST00000375299 RENBPP51606 427 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 GABARAPL2P60520 117 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 IHHQ14623 411 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 SIRPB2Q5JXA9 342 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 LDLRAD1Q5T700 205 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 TTC23Q5W5X9 447 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 BEND5Q7L4P6 421 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 HID1Q8IV36 788 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 TTC30BQ8N4P2 665 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 AURKBQ96GD4 344 aaPredicted RBP20.96■□□□□ 0.95
UPF3A-202ENST00000375299 ZNF599Q96NL3 588 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 RDH12Q96NR8 316 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 TOR3AQ9H497 397 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 GIN1Q9NXP7 522 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 ZIM2Q9NZV7 527 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 ZNF232Q9UNY5 417 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 MAGED1Q9Y5V3 778 aaPredicted RBP20.96■□□□□ 0.95
UPF3A-202ENST00000375299 DGKBQ9Y6T7 804 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 FAM234BA2RU67 622 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 MBLAC1A4D2B0 266 aaPredicted RBP20.96■□□□□ 0.95
UPF3A-202ENST00000375299 TMEM247A6NEH6 219 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 SNX2O60749 519 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 GOT2P00505 430 aaKnown RBP20.96■□□□□ 0.95
UPF3A-202ENST00000375299 IL12AP29459 219 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 TMED10P49755 219 aaKnown RBP20.96■□□□□ 0.95
UPF3A-202ENST00000375299 OCA2Q04671 838 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 CRTC3Q6UUV7 619 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 SLC16A12Q6ZSM3 486 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 C14orf80Q86SX3 495 aa20.96■□□□□ 0.95
UPF3A-202ENST00000375299 TMEM209Q96SK2 561 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms