RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 UBFD1O14562 309 aaKnown RBP17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SUPT3HO75486 399 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ASLP04424 464 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SRPRAP08240 638 aaKnown RBP17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 RPS17P08708 135 aaKnown RBP17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CISD3P0C7P0 127 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ADH5P11766 374 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GFAPP14136 432 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 LHCGRP22888 699 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 RECQLP46063 649 aaPredicted RBP17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 POLR2LP62875 67 aaKnown RBP17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 BTKQ06187 659 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CHRNA6Q15825 494 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PFKFB4Q16877 469 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GEN1Q17RS7 908 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 EML3Q32P44 896 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 BRAT1Q6PJG6 821 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TXNDC11Q6PKC3 985 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CPNE9Q8IYJ1 553 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NXPE1Q8N323 547 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FBXO39Q8N4B4 442 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PLEKHG4BQ96PX9 1271 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 BRD9Q9H8M2 597 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SFXN1Q9H9B4 322 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 DUS2Q9NX74 493 aaKnown RBP17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CRLS1Q9UJA2 301 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TRAF6Q9Y4K3 522 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TRANK1O15050 2925 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CHUKO15111 745 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 BNIP3LO60238 219 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ADH1CP00326 375 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 FGF4P08620 206 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CHRM1P11229 460 aaPredicted RBP17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CCND1P24385 295 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CA5AP35218 305 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PGM1P36871 562 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 HERC3Q15034 1050 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CHRDL2Q6WN34 429 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 MACC1Q6ZN28 852 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 RPS27LQ71UM5 84 aaKnown RBP17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 GPR26Q8NDV2 337 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CEP70Q8NHQ1 597 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 EEF1AKMT1Q8WVE0 214 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 RSPRY1Q96DX4 576 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 HEPHQ9BQS7 1158 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DENND2DQ9H6A0 471 aaPredicted RBP17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SLC27A6Q9Y2P4 619 aa17.83■□□□□ 0.44
HLA-DQB1-201ENST00000374943 COL4A3Q01955 1670 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TM7SF2O76062 418 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 COX4I1P13073 169 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PIK3R1P27986 724 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NNMTP40261 264 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DGKGP49619 791 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PTSQ03393 145 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 KCNC3Q14003 757 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PTRHD1Q6GMV3 140 aaKnown RBP17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CHSY3Q70JA7 882 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PELI3Q8N2H9 469 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NAT16Q8N8M0 369 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ASIC4Q96FT7 647 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 KLHL32Q96NJ5 620 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 BOCQ9BWV1 1114 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SLC8A2Q9UPR5 921 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 YBX2Q9Y2T7 364 aaKnown RBP17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 WASF2Q9Y6W5 498 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DENND4AQ7Z401 1863 aa17.82■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TRIM24O15164 1050 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CDK14O94921 469 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SIX3O95343 332 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 C1SP09871 688 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ZNF30P17039 623 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 MXRA7P84157 204 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CRY1Q16526 586 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CLYBLQ8N0X4 340 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 POU5F2Q8N7G0 328 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 C12orf76Q8N812 135 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 AGAP11Q8TF27 550 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CCDC97Q96F63 343 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 LRIG1Q96JA1 1093 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PPP1R36Q96LQ0 422 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 RTKNQ9BST9 563 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CIPCQ9C0C6 399 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NUDT4Q9NZJ9 180 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 B4GALT6Q9UBX8 382 aa17.81■□□□□ 0.44
HLA-DQB1-201ENST00000374943 IQCF5A8MTL0 148 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PEX11AO75192 247 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CYP2A6P11509 494 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 UGT1A6P19224 532 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 UGT1A1P22309 533 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 UGT1A4P22310 534 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 EEF1DP29692 281 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 UGT1A3P35503 534 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 UGT1A5P35504 534 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SH3BP2P78314 561 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 LCP2Q13094 533 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 UGT3A2Q3SY77 523 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ANKS6Q68DC2 871 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 NXNQ6DKJ4 435 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TMC5Q6UXY8 1006 aa17.8■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ADAMTSL2Q86TH1 951 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms