RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 MPP4Q96JB8 637 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 TRIB3Q96RU7 358 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 NPAS2Q99743 824 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 TDRD1Q9BXT4 1180 aaKnown RBP13.18□□□□□ -0.3
A1CF-204ENST00000373997 SLC28A3Q9HAS3 691 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 EML4Q9HC35 981 aaKnown RBP13.18□□□□□ -0.3
A1CF-204ENST00000373997 ACSS2Q9NR19 701 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 INTS6Q9UL03 887 aaKnown RBP13.18□□□□□ -0.3
A1CF-204ENST00000373997 ARL5AQ9Y689 179 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 A0A1B0GVG6 124 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 SLC4A1P02730 911 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 HLA-FP30511 346 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 SLC12A2P55011 1212 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 MPP1Q00013 466 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 TRAF2Q12933 501 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 CTBP1Q13363 440 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 RAB30Q15771 203 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 SLC14A2Q15849 920 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 LRRC23Q53EV4 343 aaPredicted RBP13.18□□□□□ -0.3
A1CF-204ENST00000373997 INO80DQ53TQ3 878 aaPredicted RBP13.18□□□□□ -0.3
A1CF-204ENST00000373997 IRAK1BP1Q5VVH5 260 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 RETSATQ6NUM9 610 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 TRIM67Q6ZTA4 783 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 METTL25Q8N6Q8 603 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 DRAXINQ8NBI3 349 aaPredicted RBP13.18□□□□□ -0.3
A1CF-204ENST00000373997 TXNDC5Q8NBS9 432 aaKnown RBP13.18□□□□□ -0.3
A1CF-204ENST00000373997 EZH1Q92800 747 aaPredicted RBP13.18□□□□□ -0.3
A1CF-204ENST00000373997 RPL10LQ96L21 214 aaKnown RBP13.18□□□□□ -0.3
A1CF-204ENST00000373997 MARK4Q96L34 752 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 SMIM14Q96QK8 99 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.18□□□□□ -0.3
A1CF-204ENST00000373997 ADA2Q9NZK5 511 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 PCDHGA7Q9Y5G6 932 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 RAI2Q9Y5P3 530 aa13.18□□□□□ -0.3
A1CF-204ENST00000373997 RNASEH2AO75792 299 aaKnown RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 POU2F2P09086 479 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 ZNF26P17031 533 aaPredicted RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 PSMC3P17980 439 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 MSX2P35548 267 aaPredicted RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 SLC1A2P43004 574 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 CTSOP43234 321 aaPredicted RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 STK19P49842 368 aaPredicted RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 TAS2R39P59534 338 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 CDKL1Q00532 357 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 RHDQ02161 417 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 GALNT1Q10472 559 aaPredicted RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 PTPRCAPQ14761 206 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 FUT11Q495W5 492 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 PITRM1Q5JRX3 1037 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 LY6G5CQ5SRR4 150 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 C6orf52Q5T4I8 152 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 ZNF470Q6ECI4 717 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 MFSD6LQ8IWD5 586 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 RNF148Q8N7C7 305 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 ST13P5Q8NFI4 369 aaPredicted RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 OR13J1Q8NGT2 312 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 GABPB2Q8TAK5 448 aaPredicted RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 IRF7Q92985 503 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 ELMO2Q96JJ3 720 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 ZNF597Q96LX8 424 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 PRPF18Q99633 342 aaKnown RBP13.17□□□□□ -0.3
A1CF-204ENST00000373997 HAUS8Q9BT25 410 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 LMAN2LQ9H0V9 348 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 POMKQ9H5K3 350 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 SFXN1Q9H9B4 322 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 MEAF6Q9HAF1 191 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 SPHK2Q9NRA0 654 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 GTSE1Q9NYZ3 720 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 APPL1Q9UKG1 709 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 AP4S1Q9Y587 144 aa13.17□□□□□ -0.3
A1CF-204ENST00000373997 SOBPA7XYQ1 873 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 TRIM24O15164 1050 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 LDB2O43679 373 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 EPOP01588 193 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 TYRP14679 529 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 ARSDP51689 593 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 INHBCP55103 352 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 TXNL4AP83876 142 aaKnown RBP13.16□□□□□ -0.3
A1CF-204ENST00000373997 PFKPQ01813 784 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 SULT2A1Q06520 285 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 FAM83EQ2M2I3 478 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 NCEH1Q6PIU2 408 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 HACD2Q6Y1H2 254 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 GK5Q6ZS86 529 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 CHERPQ8IWX8 916 aaKnown RBP13.16□□□□□ -0.3
A1CF-204ENST00000373997 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 HEXDCQ8WVB3 486 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 ACDQ96AP0 544 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 EME1Q96AY2 570 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 DNAJC1Q96KC8 554 aaKnown RBP13.16□□□□□ -0.3
A1CF-204ENST00000373997 OSBPL11Q9BXB4 747 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 GRIP2Q9C0E4 1043 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 TNKS2Q9H2K2 1166 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 TBC1D14Q9P2M4 693 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 FBXO5Q9UKT4 447 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 SPO11Q9Y5K1 396 aa13.16□□□□□ -0.3
A1CF-204ENST00000373997 MROH6A6NGR9 719 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms