RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 LINC01387J3KSC0 135 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 PHGDHO43175 533 aaKnown RBP8.8□□□□□ -1
ATG4A-203ENST00000372232 SCO1O75880 301 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 KRT37O76014 449 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 IFNA16P05015 189 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 LGALS2P05162 132 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 NFICP08651 508 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 KRT19P08727 400 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 STAG3L1P0CL83 205 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 SPNP16150 400 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 EPHX2P34913 555 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 MAPKAPK2P49137 400 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 NPY2RP49146 381 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 RGS7P49802 495 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 YWHAEP62258 255 aaKnown RBP8.8□□□□□ -1
ATG4A-203ENST00000372232 PIGHQ14442 188 aaPredicted RBP8.8□□□□□ -1
ATG4A-203ENST00000372232 ZNF460Q14592 562 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 MFSD13AQ14CX5 517 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 MORF4L2Q15014 288 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 HIST2H2ACQ16777 129 aaPredicted RBP8.8□□□□□ -1
ATG4A-203ENST00000372232 ZNF792Q3KQV3 632 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 TBRG1Q3YBR2 411 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 DENND1BQ6P3S1 775 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 BBS12Q6ZW61 710 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 SLCO6A1Q86UG4 719 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 CPA6Q8N4T0 437 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 CCDC185Q8N715 623 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 LINC01465Q8N7H1 131 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 NIPA2Q8N8Q9 360 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 ZSCAN1Q8NBB4 408 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 FLCNQ8NFG4 579 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 GPRC5AQ8NFJ5 357 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 OR2T3Q8NH03 318 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 KCTD4Q8WVF5 259 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 GTF2H4Q92759 462 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 NKD2Q969F2 451 aaPredicted RBP8.8□□□□□ -1
ATG4A-203ENST00000372232 CIDECQ96AQ7 238 aaPredicted RBP8.8□□□□□ -1
ATG4A-203ENST00000372232 DUS3LQ96G46 650 aaKnown RBP8.8□□□□□ -1
ATG4A-203ENST00000372232 MAGED4Q96JG8 741 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 SLITRK1Q96PX8 696 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 MECRQ9BV79 373 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 SEMA6AQ9H2E6 1030 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 SYBUQ9NX95 663 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 SLC39A1Q9NY26 324 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 ZC3H7BQ9UGR2 993 aaKnown RBP8.8□□□□□ -1
ATG4A-203ENST00000372232 PACSIN3Q9UKS6 424 aa8.8□□□□□ -1
ATG4A-203ENST00000372232 A0A087WZ62 844 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 LOC100653049A0A140TA62 436 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 LACTBL1A8MY62 500 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 DLGAP1O14490 977 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 GPR39O43194 453 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 KRT34O76011 436 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ZIC2O95409 532 aaPredicted RBP8.79□□□□□ -1
ATG4A-203ENST00000372232 YES1P07947 543 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ME2P23368 584 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 POLR2IP36954 125 aaKnown RBP8.79□□□□□ -1
ATG4A-203ENST00000372232 HTR3AP46098 478 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 RAP1GAPP47736 663 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ID4P47928 161 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 SERPINH1P50454 418 aaKnown RBP8.79□□□□□ -1
ATG4A-203ENST00000372232 TOP3AQ13472 1001 aaPredicted RBP8.79□□□□□ -1
ATG4A-203ENST00000372232 CEACAM7Q14002 265 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 TYSND1Q2T9J0 566 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 SLC36A3Q495N2 470 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 MTX3Q5HYI7 312 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ZNF667Q5HYK9 610 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 IRAK1BP1Q5VVH5 260 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 METTL11BQ5VVY1 283 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 KIAA1211LQ6NV74 962 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ABRAXAS1Q6UWZ7 409 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 MFSD7Q6UXD7 560 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ARCQ7LC44 396 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 VN1R5Q7Z5H4 357 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 TDRD5Q8NAT2 981 aaKnown RBP8.79□□□□□ -1
ATG4A-203ENST00000372232 BPIFB6Q8NFQ5 453 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 PPTC7Q8NI37 304 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 PIWIL2Q8TC59 973 aaKnown RBP8.79□□□□□ -1
ATG4A-203ENST00000372232 LRTOMTQ8WZ04 291 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ZNF778Q96MU6 729 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 FDXACB1Q9BRP7 624 aaPredicted RBP8.79□□□□□ -1
ATG4A-203ENST00000372232 ADI1Q9BV57 179 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ZNF700Q9H0M5 742 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 LHX5Q9H2C1 402 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 CD320Q9NPF0 282 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 PRDM8Q9NQV8 689 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 FAM86C1Q9NVL1 165 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 EMC3Q9P0I2 261 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ENOPH1Q9UHY7 261 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 KLF15Q9UIH9 416 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 SHOC2Q9UQ13 582 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 PLLPQ9Y342 182 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 A0A096LPE4 126 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 A0A1W2PPZ6 126 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 PDZK1P1A8MUH7 402 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 COPEO14579 308 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 PLD2O14939 933 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 MED7O43513 233 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 LIASO43766 372 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 SERPINI2O75830 405 aa8.79□□□□□ -1
ATG4A-203ENST00000372232 ZMPSTE24O75844 475 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms