RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 SPRP35270 261 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 LEPRP48357 1165 aaKnown RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 LIMK2P53671 638 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ATXN3P54252 364 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 MPP1Q00013 466 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ARHGEF7Q14155 803 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ZNF776Q68DI1 518 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 CAPRIN2Q6IMN6 1127 aaKnown RBP18.31■□□□□ 0.52
VEGFA-206ENST00000372077 NSL1Q96IY1 281 aa18.31■□□□□ 0.52
VEGFA-206ENST00000372077 ZNF106Q9H2Y7 1883 aaKnown RBP18.3■□□□□ 0.52
VEGFA-206ENST00000372077 PRR5-ARHGAP8B1AHC4 643 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 CHRNB1P11230 501 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 GNAZP19086 355 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 C5AR1P21730 350 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 DRD3P35462 400 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 PGM1P36871 562 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 ARHGAP8P85298 464 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 SEMA3AQ14563 771 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 MRNIPQ6NTE8 343 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 TIFABQ6ZNK6 161 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 ZC3HC1Q86WB0 502 aaKnown RBP18.3■□□□□ 0.52
VEGFA-206ENST00000372077 RPLP0P6Q8NHW5 317 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 ITFG2Q969R8 447 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 RAB7BQ96AH8 199 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 NDRG2Q9UN36 371 aaKnown RBP18.3■□□□□ 0.52
VEGFA-206ENST00000372077 TTC36A6NLP5 189 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 ITGA2BP08514 1039 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 P2RY2P41231 377 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 SPINT3P49223 89 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 CCDC15Q0P6D6 951 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 ELP6Q0PNE2 266 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 TYSND1Q2T9J0 566 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 FASTKD1Q53R41 847 aaKnown RBP18.3■□□□□ 0.52
VEGFA-206ENST00000372077 EOGTQ5NDL2 527 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 ATG14Q6ZNE5 492 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 CMC1Q7Z7K0 106 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 BTBD10Q9BSF8 475 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 RHOJQ9H4E5 214 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 IL26Q9NPH9 171 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 NMRK1Q9NWW6 199 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 APPL1Q9UKG1 709 aa18.3■□□□□ 0.52
VEGFA-206ENST00000372077 PLK4O00444 970 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 MID1O15344 667 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 RFPL1O75677 317 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 S1PR4O95977 384 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 SPAM1P38567 509 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 STARD6P59095 220 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 CNTN1Q12860 1018 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 PIP5KL1Q5T9C9 394 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 ZDHHC20Q5W0Z9 365 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 LIPIQ6XZB0 460 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 RAVER1Q8IY67 606 aaKnown RBP18.29■□□□□ 0.52
VEGFA-206ENST00000372077 AADATQ8N5Z0 425 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 PNPLA1Q8N8W4 532 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 GPR26Q8NDV2 337 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 MKRN2Q9H000 416 aaKnown RBP18.29■□□□□ 0.52
VEGFA-206ENST00000372077 MMP17Q9ULZ9 603 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 ATG2BQ96BY7 2078 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 KRBA1A5PL33 1030 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 H0Y858 1186 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 SLC25A3Q00325 362 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 TMEM52BQ4KMG9 183 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 SH2D5Q6ZV89 423 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 RBM15BQ8NDT2 890 aaKnown RBP18.29■□□□□ 0.52
VEGFA-206ENST00000372077 PKD2L2Q9NZM6 624 aa18.29■□□□□ 0.52
VEGFA-206ENST00000372077 DPPA5A6NC42 116 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 PSMD11O00231 422 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 PDE5AO76074 875 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 PRSS56P0CW18 603 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 ANO7Q6IWH7 933 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 HSD11B1LQ7Z5J1 315 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 SDCCAG8Q86SQ7 713 aaPredicted RBP18.28■□□□□ 0.52
VEGFA-206ENST00000372077 SYNPOQ8N3V7 929 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 CFAP61Q8NHU2 1237 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 FAM131CQ96AQ9 280 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 VPS39Q96JC1 886 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 PLEKHG4BQ96PX9 1271 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 TCF12Q99081 682 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 VPS11Q9H270 941 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 NFKBIL1Q9UBC1 381 aaPredicted RBP18.28■□□□□ 0.52
VEGFA-206ENST00000372077 ITM2BQ9Y287 266 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 RGSL1A5PLK6 1076 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 TM9SF1O15321 606 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 SRP72O76094 671 aaKnown RBP18.28■□□□□ 0.52
VEGFA-206ENST00000372077 CD151P48509 253 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 CACNG1Q06432 222 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 ZNF789Q5FWF6 425 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 RFLNAQ6ZTI6 216 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 TECPR1Q7Z6L1 1165 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 LDB1Q86U70 411 aaPredicted RBP18.28■□□□□ 0.52
VEGFA-206ENST00000372077 ISL2Q96A47 359 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 PTCD3Q96EY7 689 aaKnown RBP18.28■□□□□ 0.52
VEGFA-206ENST00000372077 CAB39LQ9H9S4 337 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 MTO1Q9Y2Z2 717 aaKnown RBP18.28■□□□□ 0.52
VEGFA-206ENST00000372077 FADS3Q9Y5Q0 445 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 SLC30A1Q9Y6M5 507 aa18.28■□□□□ 0.52
VEGFA-206ENST00000372077 CCDC22O60826 627 aa18.27■□□□□ 0.52
VEGFA-206ENST00000372077 SMNDC1O75940 238 aaKnown RBP eCLIP18.27■□□□□ 0.524e-7■■□□□ 12.8
VEGFA-206ENST00000372077 UBTFL6P0CB48 400 aaPredicted RBP18.27■□□□□ 0.52
VEGFA-206ENST00000372077 MSX2P35548 267 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms