RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 COPS8Q99627 209 aa17.45■□□□□ 0.38
VPS37B-202ENST00000371248 PHPT1Q9NRX4 125 aaPredicted RBP17.45■□□□□ 0.38
VPS37B-202ENST00000371248 ZDHHC3Q9NYG2 299 aa17.45■□□□□ 0.38
VPS37B-202ENST00000371248 EXOC1LA0A1B0GW35 172 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 POC1B-GALNT4F8VUJ3 575 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 DLL1O00548 723 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 RHOBTB1O94844 696 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 HAUS5O94927 633 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 S1PR4O95977 384 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 PRR23BQ6ZRT6 265 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 STRA8Q7Z7C7 330 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 LRRC6Q86X45 466 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 DDHD1Q8NEL9 900 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 CCDC97Q96F63 343 aaPredicted RBP17.44■□□□□ 0.38
VPS37B-202ENST00000371248 COX14Q96I36 57 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 CCDC77Q9BR77 488 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 BOCQ9BWV1 1114 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 MED4Q9NPJ6 270 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 NSMCE4AQ9NXX6 385 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 VPS18Q9P253 973 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 A6NNZ2 444 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 PFDN6O15212 129 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 OR1I1O60431 355 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 AHSGP02765 367 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 AKT1P31749 480 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 LEPRP48357 1165 aaKnown RBP17.44■□□□□ 0.38
VPS37B-202ENST00000371248 PFN3P60673 137 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 KHDC1Q4VXA5 237 aaKnown RBP17.44■□□□□ 0.38
VPS37B-202ENST00000371248 Q6ZSR6 202 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 KIAA0408Q6ZU52 694 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 MARK2Q7KZI7 788 aaKnown RBP17.44■□□□□ 0.38
VPS37B-202ENST00000371248 ABI3BPQ7Z7G0 1075 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 SLC26A11Q86WA9 606 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 OR2W6PQ8NHA6 318 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 C1orf216Q8TAB5 229 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 TXNDC16Q9P2K2 825 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 CRYL1Q9Y2S2 319 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 TMEM98Q9Y2Y6 226 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 OAS3Q9Y6K5 1087 aaKnown RBP17.44■□□□□ 0.38
VPS37B-202ENST00000371248 R4GN57 208 aa17.44■□□□□ 0.38
VPS37B-202ENST00000371248 UBA6A0AVT1 1052 aaPredicted RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 CACNB4O00305 520 aaPredicted RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 ASMTLO95671 621 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 MYCLP1P12525 358 aaPredicted RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 MSH3P20585 1137 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 GABRB3P28472 473 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 RACK1P63244 317 aaKnown RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 TMEM115Q12893 351 aaPredicted RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 PDE1CQ14123 709 aaPredicted RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 KYAT3Q6YP21 454 aaKnown RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 CCDC91Q7Z6B0 441 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 OR13H1Q8NG92 308 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 NAT14Q8WUY8 206 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 TRIM39Q9HCM9 518 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 TM9SF3Q9HD45 589 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 INTS10Q9NVR2 710 aaKnown RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 PLAAQ9Y263 795 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 ATXN2Q99700 1313 aaKnown RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 VPS13AQ96RL7 3174 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 FAM155BO75949 473 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 NUDT17P0C025 328 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 CD38P28907 300 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 ABCG1P45844 678 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 YPEL5P62699 121 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 B4GALNT1Q00973 533 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 NAB1Q13506 487 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 ITIH4Q14624 930 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 RNF187Q5TA31 235 aaPredicted RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 CNSTQ6PJW8 725 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 DOK6Q6PKX4 331 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 RBFAQ8N0V3 343 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 SCG3Q8WXD2 468 aaKnown RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 LPGAT1Q92604 370 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 KLHDC7BQ96G42 594 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 DCUN1D1Q96GG9 259 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 PAFAH2Q99487 392 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 CPNE1Q99829 537 aa17.43■□□□□ 0.38
VPS37B-202ENST00000371248 RRP15Q9Y3B9 282 aaKnown RBP17.43■□□□□ 0.38
VPS37B-202ENST00000371248 KNL1Q8NG31 2342 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 PI4KAP42356 2102 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 IGLV3-16A0A075B6K0 115 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 TOR1BO14657 336 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 THEGLP0DJG4 465 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 RALBP11234 206 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 ZNF7P17097 686 aaPredicted RBP17.42■□□□□ 0.38
VPS37B-202ENST00000371248 MSH2P43246 934 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 RABIFP47224 123 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 THOP1P52888 689 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 ADGRG6Q86SQ4 1221 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 FAM174AQ8TBP5 190 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 OR2AG1Q9H205 316 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 ATXN10Q9UBB4 475 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 VPS9D1Q9Y2B5 631 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 IKBKGQ9Y6K9 419 aa17.42■□□□□ 0.38
VPS37B-202ENST00000371248 TMEM202A6NGA9 273 aa17.41■□□□□ 0.38
VPS37B-202ENST00000371248 CFAP99D6REC4 459 aa17.41■□□□□ 0.38
VPS37B-202ENST00000371248 BCAT2O15382 392 aaPredicted RBP17.41■□□□□ 0.38
VPS37B-202ENST00000371248 CDK14O94921 469 aa17.41■□□□□ 0.38
VPS37B-202ENST00000371248 WNT1P04628 370 aa17.41■□□□□ 0.38
VPS37B-202ENST00000371248 HOXC4P09017 264 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms