RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CCNYL2Q5T2Q4 361 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 SPATA9Q9BWV2 254 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 NR2E3Q9Y5X4 410 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PDE2AO00408 941 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 DRG2P55039 364 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 RGS8P57771 180 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PCDH1Q08174 1060 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 RFTN2Q52LD8 501 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 C9orf64Q5T6V5 341 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 SNX20Q7Z614 316 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 CPSF7Q8N684 471 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 C12orf29Q8N999 325 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 GRPEL2Q8TAA5 225 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 CLP1Q92989 425 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 TCF25Q9BQ70 676 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 CCDC86Q9H6F5 360 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 KCNQ5Q9NR82 932 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 A0A0U1RQJ8 604 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 TUBA1BP68363 451 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PPP3CAQ08209 521 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 RNF220Q5VTB9 566 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 TUBA1AQ71U36 451 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 GPR65Q8IYL9 337 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 OR52J3Q8NH60 311 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 UROC1Q96N76 676 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PDCD2LQ9BRP1 358 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 TMEM134Q9H6X4 195 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 RPL26L1Q9UNX3 145 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 hCG_1818297A0A087WSY0 165 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 EME2A4GXA9 379 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 ABLIM1O14639 778 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 CXCR3P49682 368 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PTPN20Q4JDL3 420 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 LRRC38Q5VT99 294 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 AADACL4Q5VUY2 407 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 TCEAL6Q6IPX3 200 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PDPRQ8NCN5 879 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 METTL8Q9H825 291 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 IFT80Q9P2H3 777 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PREX1Q8TCU6 1659 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 MPZL2O60487 215 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 MATN4O95460 622 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 PSKH1P11801 424 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 OGNP20774 298 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 NBPF12Q5TAG4 269 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 TMC8Q8IU68 726 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 ABHD16BQ9H3Z7 469 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 ACSS3Q9H6R3 686 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 LRTM1Q9HBL6 345 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 C11orf16Q9NQ32 467 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 BLOC1S4Q9NUP1 217 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 SLC17A7Q9P2U7 560 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 EML1O00423 815 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 SIN3BO75182 1162 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 ANGPTL1O95841 491 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 HDCP19113 662 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 GDI2P50395 445 aaKnown RBP12.38□□□□□ -0.43
HCFC1-202ENST00000369984 SLC30A6Q6NXT4 461 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 GJD3Q8N144 294 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 OR5T3Q8NGG3 340 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 MAFIPQ8WZ33 124 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 CDH7Q9ULB5 785 aa12.38□□□□□ -0.43
HCFC1-202ENST00000369984 CAPN8A6NHC0 703 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 LGR5O75473 907 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 ECHS1P30084 290 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 MARCKSL1P49006 195 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 RPL7AP62424 266 aaKnown RBP12.37□□□□□ -0.43
HCFC1-202ENST00000369984 DLG2Q15700 870 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 TIGD2Q4W5G0 525 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 GLYATQ6IB77 296 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 THAP5Q7Z6K1 395 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 SGCDQ92629 289 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 CHIAQ9BZP6 476 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 KCND1Q9NSA2 647 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 ZSCAN5BA6NJL1 495 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 SLC33A1O00400 549 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-202ENST00000369984 CLDN5O00501 218 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 FGF1P05230 155 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 GNALP38405 381 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 PPP3R1P63098 170 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 C6orf183Q5T699 404 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 UNC93AQ86WB7 457 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 TEX19Q8NA77 164 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 ALG2Q9H553 416 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 REXO2Q9Y3B8 237 aaKnown RBP12.37□□□□□ -0.43
HCFC1-202ENST00000369984 USP31Q70CQ4 1352 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 ARID1BQ8NFD5 2236 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-202ENST00000369984 DCLK1O15075 740 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 DNASE1L1P49184 302 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 RPP38P78345 283 aaKnown RBP12.37□□□□□ -0.43
HCFC1-202ENST00000369984 TXNL4AP83876 142 aaKnown RBP12.37□□□□□ -0.43
HCFC1-202ENST00000369984 QPCTQ16769 361 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 DUPD1Q68J44 220 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 CLPTM1LQ96KA5 538 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 BRINP2Q9C0B6 783 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 AGO1Q9UL18 857 aaKnown RBP12.37□□□□□ -0.43
HCFC1-202ENST00000369984 PCDHB9Q9Y5E1 797 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 ARL5CA6NH57 179 aa12.37□□□□□ -0.43
HCFC1-202ENST00000369984 DDTLA6NHG4 134 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms