RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 VTNP04004 478 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 RAP2AP10114 183 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 NCK1P16333 377 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 WARSP23381 471 aaKnown RBP17.3■□□□□ 0.36
CHTOP-203ENST00000368690 NDUFV1P49821 464 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 MAPRE1Q15691 268 aaKnown RBP17.3■□□□□ 0.36
CHTOP-203ENST00000368690 PYCR3Q53H96 274 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 PERM1Q5SV97 790 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 LDLRAP1Q5SW96 308 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 OTUD3Q5T2D3 398 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-203ENST00000368690 SLCO6A1Q86UG4 719 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 IFNEQ86WN2 208 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 TMEM199Q8N511 208 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 DNAJB14Q8TBM8 379 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 TUBGCP3Q96CW5 907 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 NSMCE2Q96MF7 247 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 RNF145Q96MT1 663 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 LRRC3Q9BY71 257 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 KLHL25Q9H0H3 589 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 MID1IP1Q9NPA3 183 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 FAM118AQ9NWS6 357 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 THG1LQ9NWX6 298 aaKnown RBP17.3■□□□□ 0.36
CHTOP-203ENST00000368690 USE1Q9NZ43 259 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 KLHL3Q9UH77 587 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 SNX5Q9Y5X3 404 aa17.3■□□□□ 0.36
CHTOP-203ENST00000368690 ASPDHA6ND91 283 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 LRIG2O94898 1065 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 PAPSS2O95340 614 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 HOXD8P13378 290 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 HOXB8P17481 243 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 GRK3P35626 688 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 KCNC1P48547 511 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 CXCR3P49682 368 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 KPNA1P52294 538 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 IFITM3Q01628 133 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 POLD3Q15054 466 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 EML3Q32P44 896 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 ZIK1Q3SY52 487 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 LACC1Q8IV20 430 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 KIAA2013Q8IYS2 634 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 CLEC4FQ8N1N0 589 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 TMBIM1Q969X1 311 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 TSPAN18Q96SJ8 248 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 COLEC11Q9BWP8 271 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 TUBB1Q9H4B7 451 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 ARNT2Q9HBZ2 717 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 AIG1Q9NVV5 245 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 SNTG2Q9NY99 539 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 CYBAP13498 195 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 PCMT1P22061 227 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 BDNFP23560 247 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 ZFP36L2P47974 494 aaKnown RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 DAOAP59103 153 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 ACOX1Q15067 660 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 INAQ16352 499 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 CLPPQ16740 277 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 DGUOKQ16854 277 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 FAM98BQ52LJ0 330 aaKnown RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 ZNF789Q5FWF6 425 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 TMEM214Q6NUQ4 689 aaKnown RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 CLEC20AQ6ZU45 233 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 CATSPER4Q7RTX7 472 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 AADATQ8N5Z0 425 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 ZNF555Q8NEP9 628 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 PHF10Q8WUB8 498 aaKnown RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 ISG20Q96AZ6 181 aaKnown RBP17.29■□□□□ 0.36
CHTOP-203ENST00000368690 SEPHS2Q99611 448 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 FSD1LQ9BXM9 530 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 BRINP2Q9C0B6 783 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 TOR3AQ9H497 397 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 CPNE5Q9HCH3 593 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 ANKHQ9HCJ1 492 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 TRPV5Q9NQA5 729 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 GINS2Q9Y248 185 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 IFT52Q9Y366 437 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 PCDHGA8Q9Y5G5 932 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 DGKBQ9Y6T7 804 aa17.29■□□□□ 0.36
CHTOP-203ENST00000368690 SPTLC1O15269 473 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 NDUFS2O75306 463 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 F2P00734 622 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 SMIM10L2AP0DMW4 78 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 SMIM10L2BP0DMW5 78 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 TSPAN8P19075 237 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 MFSD10Q14728 455 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 DPY19L1Q2PZI1 675 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 TMEM207Q6UWW9 146 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 PIWIL3Q7Z3Z3 882 aaKnown RBP17.28■□□□□ 0.36
CHTOP-203ENST00000368690 CILP2Q8IUL8 1156 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 SCML4Q8N228 414 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 RHEBL1Q8TAI7 183 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 ZFP90Q8TF47 636 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 ZNF566Q969W8 418 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 FAM49AQ9H0Q0 323 aaPredicted RBP17.28■□□□□ 0.36
CHTOP-203ENST00000368690 SP140LQ9H930 580 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 CNGB3Q9NQW8 809 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 DDIT4Q9NX09 232 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 DSEQ9UL01 958 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 CCDC154A6NI56 674 aa17.28■□□□□ 0.36
CHTOP-203ENST00000368690 ZNF99A8MXY4 864 aaPredicted RBP17.28■□□□□ 0.36
CHTOP-203ENST00000368690 FAM47E-STBD1D6RA91 191 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms