RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 RABGEF1Q9UJ41 708 aa22.17■■□□□ 1.14
ECHDC1-203ENST00000368291 MSRB2Q9Y3D2 182 aa22.17■■□□□ 1.14
ECHDC1-203ENST00000368291 NEU2Q9Y3R4 380 aa22.17■■□□□ 1.14
ECHDC1-203ENST00000368291 FAM149AA5PLN7 773 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 MROH6A6NGR9 719 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 VEGFDO43915 354 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 OPA1O60313 960 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 LMAN1P49257 510 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 HLTFQ14527 1009 aaKnown RBP eCLIP22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 TRIP13Q15645 432 aaPredicted RBP22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 GPRC6AQ5T6X5 926 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 HES3Q5TGS1 186 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 CCDC137Q6PK04 289 aaKnown RBP22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 CCNI2Q6ZMN8 369 aaPredicted RBP22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 TMPRSS12Q86WS5 348 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 NAGSQ8N159 534 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 GALNT15Q8N3T1 639 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 DNAAF3Q8N9W5 541 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 DDHD1Q8NEL9 900 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 ZDHHC1Q8WTX9 485 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 PATE1Q8WXA2 126 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 NLE1Q9NVX2 485 aaPredicted RBP22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 APPL1Q9UKG1 709 aa22.16■■□□□ 1.14
ECHDC1-203ENST00000368291 H7C0S8 307 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 PHF2O75151 1096 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 CDK14O94921 469 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 EML2O95834 649 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 ACP5P13686 325 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 HADHAP40939 763 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 BASP1P80723 227 aaKnown RBP22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 NFATC2Q13469 925 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 SEPT6Q14141 434 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 C14orf28Q4W4Y0 310 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 PPP1R21Q6ZMI0 780 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 GDAP1Q8TB36 358 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 STYXQ8WUJ0 223 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 GATA6Q92908 595 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 NAT6Q93015 286 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 NAPGQ99747 312 aaPredicted RBP22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 ASB8Q9H765 288 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 SLC23A2Q9UGH3 650 aa22.15■■□□□ 1.14
ECHDC1-203ENST00000368291 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 TCRBV7S3A2A0A539 114 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 PRR19A6NJB7 356 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 KRT14P02533 472 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 MAZP56270 477 aaKnown RBP22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 CCDC38Q502W7 563 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 LDLRAP1Q5SW96 308 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 CDCP2Q5VXM1 449 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 CRTC3Q6UUV7 619 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 C11orf96Q7Z7L8 435 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 CREG2Q8IUH2 290 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 CCDC74AQ96AQ1 378 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 CDKN2AIPNLQ96HQ2 116 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 CCDC3Q9BQI4 270 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 KCNK6Q9Y257 313 aa22.14■■□□□ 1.14
ECHDC1-203ENST00000368291 KIF26BQ2KJY2 2108 aa22.14■■□□□ 1.13
ECHDC1-203ENST00000368291 CCDC78A2IDD5 438 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 ECEL1O95672 775 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 VPS41P49754 854 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 ARSDP51689 593 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 CTSCP53634 463 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 CAMK2BQ13554 666 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 ZNF534Q76KX8 674 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 LRRTM4Q86VH4 590 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 RASGEF1AQ8N9B8 481 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 CCDC97Q96F63 343 aaPredicted RBP22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 RANBP9Q96S59 729 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 FAM96AQ9H5X1 160 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 TBC1D29Q9UFV1 150 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 RNF215Q9Y6U7 377 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 FRYQ5TBA9 3013 aa22.13■■□□□ 1.13
ECHDC1-203ENST00000368291 TRBV5-4A0A0C4DH59 114 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 A6NCN8 305 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 KMOO15229 486 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 GLB1P16278 677 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 TPSB2P20231 275 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 MC4RP32245 332 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 FNTAP49354 379 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 CDKN1CP49918 316 aaPredicted RBP22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 CLCNKAP51800 687 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 GPS1Q13098 491 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 KCNJ11Q14654 390 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 TPSAB1Q15661 275 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 SNX20Q7Z614 316 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 CACTIN-AS1Q8N1I8 211 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 ARL14Q8N4G2 192 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 MAPK15Q8TD08 544 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 ZNF778Q96MU6 729 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 SAR1BQ9Y6B6 198 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 TPRP12270 2363 aaKnown RBP22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 CTAGE9A4FU28 777 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 NUDT21O43809 227 aaKnown RBP22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 MT-CO3P00414 261 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 PRSS56P0CW18 603 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 JUPP14923 745 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 ZNF7P17097 686 aaPredicted RBP22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 ADRA1DP25100 572 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 MAGEA6P43360 314 aa22.12■■□□□ 1.13
ECHDC1-203ENST00000368291 B4GALNT1Q00973 533 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms