RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 AADATQ8N5Z0 425 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 FNDC8Q8TC99 324 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 PSMG2Q969U7 264 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 AGAP2Q99490 1192 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 CCDC3Q9BQI4 270 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 PIGVQ9NUD9 493 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 DNAJC28Q9NX36 388 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 MLXQ9UH92 298 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 PFDN2Q9UHV9 154 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 IRAK2O43187 625 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 HSMCR30P0CW71 290 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 PRKACBP22694 351 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 MSX2P35548 267 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-204ENST00000368210 SLC26A3P40879 764 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 RXRGP48443 463 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 NCF4Q15080 339 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 RAET1GQ6H3X3 334 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 TAS1R3Q7RTX0 852 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 CD99L2Q8TCZ2 262 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 BBS4Q96RK4 519 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 SLC39A8Q9C0K1 460 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 REEP1Q9H902 201 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 ADAMTSL3P82987 1691 aa13.19□□□□□ -0.3
PTPRK-204ENST00000368210 FANCGO15287 622 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 IL6P05231 212 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 LAG3P18627 525 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 ATF6P18850 670 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 ZNF829Q3KNS6 432 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-204ENST00000368210 FAM47BQ8NA70 645 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 PIK3C3Q8NEB9 887 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 WDR36Q8NI36 951 aaKnown RBP13.18□□□□□ -0.3
PTPRK-204ENST00000368210 UBE2E3Q969T4 207 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 TSEN34Q9BSV6 310 aaKnown RBP13.18□□□□□ -0.3
PTPRK-204ENST00000368210 EHD1Q9H4M9 534 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 KRCC1Q9NPI7 259 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-204ENST00000368210 CACNG4Q9UBN1 327 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 MAPRE3Q9UPY8 281 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
PTPRK-204ENST00000368210 TBC1D30Q9Y2I9 924 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 ILVBLA1L0T0 632 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 SLC22A3O75751 556 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 GLUD1P00367 558 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 TNK2Q07912 1038 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 C6orf89Q6UWU4 347 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 LINGO4Q6UY18 593 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 OR8H1Q8NGG4 311 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 CXorf40AQ8TE69 158 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 CD101Q93033 1021 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 PRRG3Q9BZD7 231 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 DHRS12A0PJE2 317 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 CA12O43570 354 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 SGTAO43765 313 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 CDH4P55283 916 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 PRKCZQ05513 592 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 NCBP2-AS2Q69YL0 99 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 ZNF549Q6P9A3 640 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 CERS6Q6ZMG9 384 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 GPR180Q86V85 440 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 CIR1Q86X95 450 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-204ENST00000368210 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 MCFD2Q8NI22 146 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 QRFPRQ96P65 431 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 PCYT2Q99447 389 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 GPR21Q99679 349 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 C1QTNF7Q9BXJ2 289 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 EBF3Q9H4W6 596 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 RERGLQ9H628 205 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 IGFLR1Q9H665 355 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 DUSP12Q9UNI6 340 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 SLC45A1Q9Y2W3 748 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 PCDHB1Q9Y5F3 818 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 PCDHGC4Q9Y5F7 938 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 A0A0J9YYE9 177 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 BOLA2-SMG1P6H3BVE0 249 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 PRKD3O94806 890 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 IL1BP01584 269 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 GRIA1P42261 906 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 TAS2R39P59534 338 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 RPL26P61254 145 aaKnown RBP13.18□□□□□ -0.3
PTPRK-204ENST00000368210 IL10RBQ08334 325 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 INCA1Q0VD86 236 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 ABRQ12979 859 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 DGCR6Q14129 220 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 TCEAL1Q15170 157 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 GK5Q6ZS86 529 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 HPS6Q86YV9 775 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 CLPTM1LQ96KA5 538 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 EGFL7Q9UHF1 273 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 GTF2IRD1Q9UHL9 959 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 EVLQ9UI08 416 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-204ENST00000368210 KCNE2Q9Y6J6 123 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 MYH6P13533 1939 aa13.18□□□□□ -0.3
PTPRK-204ENST00000368210 KRT87PA6NCN2 255 aa13.17□□□□□ -0.3
PTPRK-204ENST00000368210 NPEPPSL1A6NEC2 478 aa13.17□□□□□ -0.3
PTPRK-204ENST00000368210 UGT1A9O60656 530 aa13.17□□□□□ -0.3
PTPRK-204ENST00000368210 LSAMPQ13449 338 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms